C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAN binding protein 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000141084 RANBP10 9606 - 16:67723066-67806652 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000317506 RANBP10-001 67723066-67806652 protein_coding
  ENST00000448631 RANBP10-003 67726005-67806560 protein_coding
  ENST00000602506 RANBP10-006 67726009-67806557 nonsense_mediated_decay
  ENST00000602525 RANBP10-005 67731029-67806557 retained_intron
  ENST00000602638 RANBP10-004 67731084-67806560 nonsense_mediated_decay
  ENST00000602677 RANBP10-002 67726031-67806560 protein_coding
  ENST00000602815 RANBP10-008 67734969-67806560 nonsense_mediated_decay
  ENST00000602887 RANBP10-009 67735645-67806518 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000317506ENST00000448631ENST00000602506ENST00000602638ENST00000602677ENST00000602815
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000317506 1.302±0.00 2.789±0.00 0.349±0.00 N/A 3.039±0.00 0.716±0.36 1.680±1.20 1.036±0.67 2.204±1.19 0.730±0.42 11.703±0.00 2.220±1.76 3.766±0.12 4.368±0.17
ENST00000448631 N/A N/A N/A N/A N/A 0.497±0.00 N/A N/A N/A N/A N/A N/A N/A 2.381±0.00
ENST00000602506 N/A N/A 0.498±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602638 N/A N/A N/A 0.894±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602677 N/A N/A N/A 0.852±0.00 N/A N/A N/A N/A N/A N/A 4.281±0.00 0.287±0.00 N/A N/A
ENST00000602815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.299±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AC CIL_0005AC_0001 CGP 16:67674531-67806652
CIL_0005AB CIL_0005AB_0001 CGP 16:67723066-67832148

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000226 IEA microtubule cytoskeleton organization
GO:0005087 IEA Ran guanyl-nucleotide exchange factor activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005881 IEA cytoplasmic microtubule
GO:0008536 IEA Ran GTPase binding
GO:0032853 IEA positive regulation of Ran GTPase activity
GO:0048487 IEA beta-tubulin binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062138 ranbp10 RAN binding protein 10 protein_coding Danio_rerio
ENSMUSG00000037415 Ranbp10 RAN binding protein 10 protein_coding Mus_musculus

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