C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAN binding protein 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000317506 RANBP10-001 ENSG00000141084 9606 - 16:67723066-67806652 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000317506
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000317506 1.302±0.00 2.789±0.00 0.349±0.00 3.039±0.00 0.716±0.36 1.680±1.20 1.036±0.67 2.204±1.19 0.730±0.42 11.703±0.00 2.220±1.76 3.766±0.12 4.368±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AC CIL_0005AC_0001 CGP 16:67674531-67806652
CIL_0005AB CIL_0005AB_0001 CGP 16:67723066-67832148

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000226 IEA microtubule cytoskeleton organization
GO:0005087 IEA Ran guanyl-nucleotide exchange factor activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005881 IEA cytoplasmic microtubule
GO:0008536 IEA Ran GTPase binding
GO:0032853 IEA positive regulation of Ran GTPase activity
GO:0048487 IEA beta-tubulin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041400 Ranbp10-201 protein_coding Mus_musculus 0 3393

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