C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005AB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000141084-ENSG00000102904 CGP 9606 16:67723066-67832148
GeneTranscriptPositionBiotype
ENSG00000102901 (CENPT)
centromere protein T 		ENST00000436104 (CENPT-005) 67828159-67833897 retained_intron
ENST00000440851 (CENPT-201) 67828161-67835338 protein_coding
ENST00000561593 (CENPT-011) 67832462-67847693 protein_coding
ENST00000562338 (CENPT-028) 67831794-67833931 nonsense_mediated_decay
ENST00000562462 (CENPT-007) 67830905-67833938 nonsense_mediated_decay
ENST00000562483 (CENPT-024) 67831829-67833896 retained_intron
ENST00000562513 (CENPT-033) 67828159-67833860 nonsense_mediated_decay
ENST00000562787 (CENPT-001) 67828157-67847458 protein_coding
ENST00000562947 (CENPT-026) 67830395-67832312 processed_transcript
ENST00000563885 (CENPT-009) 67828187-67833880 retained_intron
ENST00000564128 (CENPT-003) 67829949-67833946 retained_intron
ENST00000564144 (CENPT-016) 67833974-67843305 processed_transcript
ENST00000564346 (CENPT-020) 67833890-67843108 processed_transcript
ENST00000564538 (CENPT-029) 67831586-67833860 processed_transcript
ENST00000564817 (CENPT-008) 67828209-67833918 protein_coding
ENST00000565114 (CENPT-010) 67832510-67847696 protein_coding
ENST00000565132 (CENPT-014) 67833966-67846823 processed_transcript
ENST00000565157 (CENPT-006) 67828159-67833897 retained_intron
ENST00000565385 (CENPT-018) 67833945-67843129 processed_transcript
ENST00000565436 (CENPT-021) 67835248-67841950 processed_transcript
ENST00000565713 (CENPT-025) 67831216-67833943 nonsense_mediated_decay
ENST00000566067 (CENPT-030) 67831769-67833943 nonsense_mediated_decay
ENST00000566758 (CENPT-027) 67829945-67833885 protein_coding
ENST00000567482 (CENPT-017) 67834025-67843290 processed_transcript
ENST00000567985 (CENPT-019) 67833840-67843142 protein_coding
ENST00000568069 (CENPT-023) 67831220-67833929 nonsense_mediated_decay
ENST00000568495 (CENPT-031) 67828185-67830253 retained_intron
ENST00000568564 (CENPT-022) 67832392-67834212 retained_intron
ENST00000568652 (CENPT-012) 67833956-67847752 processed_transcript
ENST00000568765 (CENPT-032) 67834034-67847811 processed_transcript
ENST00000569019 (CENPT-015) 67834034-67843337 processed_transcript
ENST00000569094 (CENPT-013) 67833889-67847755 processed_transcript
ENST00000569862 (CENPT-002) 67828157-67833913 retained_intron
ENST00000574569 (CENPT-004) 67828186-67829170 retained_intron
ENSG00000141084 (RANBP10)
RAN binding protein 10 		ENST00000317506 (RANBP10-001) 67723066-67806652 protein_coding
ENST00000448631 (RANBP10-003) 67726005-67806560 protein_coding
ENST00000602506 (RANBP10-006) 67726009-67806557 nonsense_mediated_decay
ENST00000602525 (RANBP10-005) 67731029-67806557 retained_intron
ENST00000602638 (RANBP10-004) 67731084-67806560 nonsense_mediated_decay
ENST00000602677 (RANBP10-002) 67726031-67806560 protein_coding
ENST00000602815 (RANBP10-008) 67734969-67806560 nonsense_mediated_decay
ENST00000602887 (RANBP10-009) 67735645-67806518 processed_transcript
ENSG00000270165 (RP11-167P11.2)
 ENST00000602844 (RP11-167P11.2-001) 67738588-67739922 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_0005AB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037415-ENSMUSG00000031893 CGP 10090 8:105768308-105844676
GeneTranscriptPositionBiotype
ENSMUSG00000031893 (Tsnaxip1)
translin-associated factor X (Tsnax) interacting protein 1 		ENSMUST00000034365 (Tsnaxip1-201) 105827744-105844676 protein_coding
ENSMUSG00000037415 (Ranbp10)
RAN binding protein 10 		ENSMUST00000041400 (Ranbp10-201) 105768308-105827350 protein_coding

Mus musculus Ensembl (GRCm38)

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Genes
Structures from Ensembl
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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005AB_0001ENSG00000102901ENST00000436104ENST00000440851ENST00000561593ENST00000562338ENST00000562462ENST00000562483ENST00000562513ENST00000562787ENST00000562947ENST00000563885ENST00000564128ENST00000564144ENST00000564346ENST00000564538ENST00000564817ENST00000565114ENST00000565132ENST00000565157ENST00000565385ENST00000565436ENST00000565713ENST00000566067ENST00000566758ENST00000567482ENST00000567985ENST00000568069ENST00000568495ENST00000568564ENST00000568652ENST00000568765ENST00000569019ENST00000569094ENST00000569862ENST00000574569ENSG00000141084ENST00000317506ENST00000448631ENST00000602506ENST00000602525ENST00000602638ENST00000602677ENST00000602815ENST00000602887ENSG00000270165ENST00000602844CIL_0005AB_0002ENSMUSG00000031893ENSMUST00000034365ENSMUSG00000037415ENSMUST00000041400
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005AB_0001ENSG00000102901ENST00000436104ENST00000563885ENST00000564817ENST00000565157ENST00000568495ENST00000569862ENSG00000141084ENST00000317506ENST00000448631ENST00000602506ENST00000602638ENST00000602677ENST00000602815ENSG00000270165ENST00000602844CIL_0005AB_0002ENSMUSG00000031893ENSMUST00000034365ENSMUSG00000037415ENSMUST00000041400
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102901 ENST00000436104 N/A N/A N/A N/A N/A N/A 0.756±0.00 N/A N/A 2.499±0.00 N/A N/A N/A N/A
ENST00000440851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563885 N/A N/A N/A N/A N/A N/A N/A 2.384±0.00 N/A N/A N/A 11.429±0.00 N/A N/A
ENST00000564128 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564817 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.063±0.00 N/A N/A N/A N/A
ENST00000565114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565157 N/A N/A N/A N/A N/A N/A N/A N/A 1.247±0.00 8.912±0.00 N/A 22.004±0.00 N/A N/A
ENST00000565385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567482 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568495 N/A N/A N/A N/A N/A 3.435±0.00 N/A N/A N/A N/A N/A 10.826±0.00 10.438±0.00 59.961±0.00
ENST00000568564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569094 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569862 N/A N/A 0.976±0.00 N/A N/A 1.349±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000141084 ENST00000317506 1.302±0.00 2.789±0.00 0.349±0.00 N/A 3.039±0.00 0.716±0.36 1.680±1.20 1.036±0.67 2.204±1.19 0.730±0.42 11.703±0.00 2.220±1.76 3.766±0.12 4.368±0.17
ENST00000448631 N/A N/A N/A N/A N/A 0.497±0.00 N/A N/A N/A N/A N/A N/A N/A 2.381±0.00
ENST00000602506 N/A N/A 0.498±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602638 N/A N/A N/A 0.894±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602677 N/A N/A N/A 0.852±0.00 N/A N/A N/A N/A N/A N/A 4.281±0.00 0.287±0.00 N/A N/A
ENST00000602815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.299±0.00 N/A N/A N/A
ENST00000602887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000270165 ENST00000602844 0.123±0.00 0.919±0.00 0.252±0.00 0.212±0.03 0.296±0.00 0.077±0.02 0.030±0.00 0.228±0.00 N/A 0.030±0.00 N/A 0.282±0.26 0.102±0.00 0.228±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031893 ENSMUST00000034365 0.101±0.06 0.059±0.02 0.029±0.01 0.484±0.00 0.146±0.06 0.046±0.02 0.077±0.03 0.067±0.04 0.080±0.02 1.078±0.44 0.016±0.00 1.466±1.16 0.070±0.03 109.167±62.46
ENSMUSG00000037415 ENSMUST00000041400 9.423±1.57 16.010±0.79 6.615±0.43 8.738±3.43 12.541±3.16 11.633±3.40 6.828±1.14 8.883±1.91 32.823±16.44 13.181±2.94 5.668±2.27 9.047±4.26 6.651±1.51 23.090±3.78

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