C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000141101 NOB1 9606 - 16:69741867-69754940 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000268802 NOB1-001 69741867-69754940 protein_coding
  ENST00000561677 NOB1-004 69748748-69752253 retained_intron
  ENST00000562416 NOB1-005 69749310-69754917 retained_intron
  ENST00000563055 NOB1-002 69749053-69754792 retained_intron
  ENST00000564620 NOB1-006 69744903-69754914 nonsense_mediated_decay
  ENST00000569871 NOB1-003 69742576-69754924 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000268802ENST00000564620ENST00000569871
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000268802 19.578±0.00 9.213±0.00 3.335±0.00 6.509±0.00 9.182±6.61 11.351±7.07 2.864±2.23 3.262±2.66 3.856±1.86 3.855±2.90 9.354±0.00 21.066±17.57 14.171±6.14 8.517±4.18
ENST00000564620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.266±0.00 12.238±0.00 8.858±0.00
ENST00000569871 N/A N/A N/A 2.079±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KB CIL_0008KB_0001 VISTA 16:69347064-69947578
CIL_0004I2 CIL_0004I2_0001 CGP 16:69706996-69754940
CIL_0001NB CIL_0001NB_0001 CGP 16:69741867-69941741

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0007601 IEA visual perception
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016080 nob1 NIN1/RPN12 binding protein 1 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000003848 Nob1 NIN1/RPN12 binding protein 1 homolog (S. cerevisiae) protein_coding Mus_musculus

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