C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001NB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000141101-ENSG00000198373 CGP 9606 16:69741867-69941741
GeneTranscriptPositionBiotype
ENSG00000141101 (NOB1)
NIN1/RPN12 binding protein 1 homolog (S. cerevisiae) 		ENST00000268802 (NOB1-001) 69741867-69754940 protein_coding
ENST00000561677 (NOB1-004) 69748748-69752253 retained_intron
ENST00000562416 (NOB1-005) 69749310-69754917 retained_intron
ENST00000563055 (NOB1-002) 69749053-69754792 retained_intron
ENST00000564620 (NOB1-006) 69744903-69754914 nonsense_mediated_decay
ENST00000569871 (NOB1-003) 69742576-69754924 nonsense_mediated_decay
ENSG00000198373 (WWP2)
WW domain containing E3 ubiquitin protein ligase 2 		ENST00000356003 (WWP2-201) 69838737-69941741 protein_coding
ENST00000359154 (WWP2-001) 69762306-69941741 protein_coding
ENST00000544162 (WWP2-002) 69798865-69940178 processed_transcript
ENST00000561780 (WWP2-004) 69762328-69799276 protein_coding
ENST00000563618 (WWP2-009) 69838737-69888158 processed_transcript
ENST00000563659 (WWP2-006) 69762362-69798796 protein_coding
ENST00000566463 (WWP2-014) 69917583-69940176 retained_intron
ENST00000567161 (WWP2-018) 69934051-69936796 retained_intron
ENST00000567303 (WWP2-019) 69936920-69939397 retained_intron
ENST00000567579 (WWP2-013) 69894962-69929466 processed_transcript
ENST00000567986 (WWP2-008) 69799046-69871865 retained_intron
ENST00000568185 (WWP2-016) 69925012-69926096 processed_transcript
ENST00000568684 (WWP2-015) 69924990-69941738 protein_coding
ENST00000568818 (WWP2-017) 69930166-69933981 retained_intron
ENST00000568845 (WWP2-003) 69762332-69788202 processed_transcript
ENST00000569174 (WWP2-012) 69776187-69910250 protein_coding
ENST00000569297 (WWP2-011) 69890798-69940621 processed_transcript
ENST00000569620 (WWP2-005) 69762328-69840144 nonsense_mediated_decay
ENST00000569658 (WWP2-007) 69762362-69799493 retained_intron
ENST00000570104 (WWP2-010) 69871713-69908882 retained_intron
ENSG00000208017 (MIR140)
microRNA 140 		ENST00000385282 (MIR140-201) 69933073-69933182 miRNA
ENSG00000252443 (SNORA62)
Small nucleolar RNA SNORA62/SNORA6 family 		ENST00000516634 (SNORA62.1-205) 69785994-69786113 snoRNA
ENSG00000260290 (CTD-2033A16.2)
 ENST00000566277 (CTD-2033A16.2-001) 69756536-69757937 processed_pseudogene
CIL_0001NB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000003848-ENSMUSG00000031930 CGP 10090 8:107412486-107558594
GeneTranscriptPositionBiotype
ENSMUSG00000003848 (Nob1)
NIN1/RPN12 binding protein 1 homolog (S. cerevisiae) 		ENSMUST00000003946 (Nob1-001) 107412489-107425049 protein_coding
ENSMUST00000076585 (Nob1-007) 107418056-107422327 processed_transcript
ENSMUST00000109273 (Nob1-008) 107418154-107418666 retained_intron
ENSMUST00000163757 (Nob1-006) 107416238-107424986 retained_intron
ENSMUST00000163973 (Nob1-003) 107417695-107425051 retained_intron
ENSMUST00000165266 (Nob1-005) 107418350-107425026 nonsense_mediated_decay
ENSMUST00000169311 (Nob1-002) 107412486-107425041 nonsense_mediated_decay
ENSMUST00000170796 (Nob1-004) 107412486-107421562 retained_intron
ENSMUSG00000031930 (Wwp2)
WW domain containing E3 ubiquitin protein ligase 2 		ENSMUST00000166615 (Wwp2-201) 107436398-107558594 protein_coding
ENSMUSG00000059775 (Rps26-ps1)
ribosomal protein S26, pseudogene 1 		ENSMUST00000077208 (Rps26-ps1-201) 107439176-107439585 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001NB_0001ENSG00000141101ENST00000268802ENST00000561677ENST00000562416ENST00000563055ENST00000564620ENST00000569871ENSG00000198373ENST00000356003ENST00000359154ENST00000544162ENST00000561780ENST00000563618ENST00000563659ENST00000566463ENST00000567161ENST00000567303ENST00000567579ENST00000567986ENST00000568185ENST00000568684ENST00000568818ENST00000568845ENST00000569174ENST00000569297ENST00000569620ENST00000569658ENST00000570104ENSG00000208017ENST00000385282ENSG00000252443ENST00000516634ENSG00000260290ENST00000566277CIL_0001NB_0002ENSMUSG00000003848ENSMUST00000003946ENSMUST00000076585ENSMUST00000109273ENSMUST00000163757ENSMUST00000163973ENSMUST00000165266ENSMUST00000169311ENSMUST00000170796ENSMUSG00000031930ENSMUST00000166615ENSMUSG00000059775ENSMUST00000077208
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001NB_0001ENSG00000141101ENST00000268802ENST00000564620ENST00000569871ENSG00000198373ENST00000356003ENST00000359154ENST00000544162ENST00000566463ENST00000567303ENST00000568684ENST00000569174ENST00000569297ENST00000569658ENSG00000208017ENST00000385282ENSG00000252443ENST00000516634ENSG00000260290ENST00000566277CIL_0001NB_0002ENSMUSG00000003848ENSMUST00000003946ENSMUST00000076585ENSMUST00000163757ENSMUST00000170796ENSMUSG00000031930ENSMUST00000166615ENSMUSG00000059775ENSMUST00000077208
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000141101 ENST00000268802 19.578±0.00 9.213±0.00 3.335±0.00 6.509±0.00 9.182±6.61 11.351±7.07 2.864±2.23 3.262±2.66 3.856±1.86 3.855±2.90 9.354±0.00 21.066±17.57 14.171±6.14 8.517±4.18
ENST00000561677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.266±0.00 12.238±0.00 8.858±0.00
ENST00000569871 N/A N/A N/A 2.079±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198373 ENST00000356003 N/A N/A N/A N/A N/A N/A 0.585±0.00 N/A N/A N/A N/A N/A 4.680±2.04 N/A
ENST00000359154 4.642±0.00 6.433±0.00 N/A 5.164±4.22 4.950±3.62 2.593±1.81 1.594±1.14 3.607±3.17 2.337±1.62 3.722±1.83 5.520±0.00 6.346±4.25 6.634±3.20 7.523±0.98
ENST00000544162 N/A N/A N/A 1.575±0.00 1.172±0.00 1.153±0.00 0.605±0.00 N/A N/A N/A N/A 2.300±0.36 N/A 5.430±0.00
ENST00000561780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563618 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566463 N/A N/A 2.535±0.00 N/A N/A N/A N/A 2.330±0.00 N/A N/A N/A N/A N/A N/A
ENST00000567161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567303 N/A N/A N/A 3.598±0.00 5.244±0.00 N/A N/A N/A 4.454±0.00 N/A N/A 10.324±0.00 N/A 15.042±0.00
ENST00000567579 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568684 N/A N/A N/A N/A 2.541±0.00 N/A N/A 2.690±0.00 0.805±0.00 N/A N/A 1.747±0.00 N/A N/A
ENST00000568818 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569174 N/A 3.282±0.00 N/A 3.362±0.00 1.808±0.23 2.156±0.00 0.527±0.15 N/A N/A 2.824±0.00 N/A 2.621±0.00 1.845±0.00 N/A
ENST00000569297 N/A N/A N/A N/A N/A 3.274±0.00 N/A N/A N/A N/A N/A 1.711±0.85 7.496±0.00 5.125±0.00
ENST00000569620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.167±0.00 N/A N/A N/A
ENST00000570104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000208017 ENST00000385282 N/A N/A N/A N/A 0.604±0.00 N/A N/A 0.580±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000252443 ENST00000516634 N/A N/A N/A 0.534±0.00 N/A N/A N/A N/A N/A N/A N/A 10.119±0.00 N/A N/A
ENSG00000260290 ENST00000566277 0.011±0.00 N/A N/A 0.013±0.00 0.026±0.00 0.023±0.00 N/A 0.077±0.00 0.034±0.00 N/A 0.011±0.00 0.075±0.06 0.041±0.00 0.049±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000003848 ENSMUST00000003946 11.544±4.60 7.656±1.06 12.641±2.50 14.740±6.39 6.932±1.58 7.075±1.75 7.614±0.45 9.530±0.64 10.905±7.74 6.143±0.97 9.628±0.44 20.594±4.66 15.227±6.42 4.804±2.08
ENSMUST00000076585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.654±0.00
ENSMUST00000109273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163757 N/A 3.684±0.00 N/A 4.824±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.967±0.00 N/A
ENSMUST00000163973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169311 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170796 0.990±0.00 4.289±0.13 4.977±1.12 8.004±2.81 3.338±0.35 3.146±0.00 1.516±0.43 1.672±0.16 3.007±1.92 N/A 1.517±0.27 4.501±1.20 3.926±1.70 1.331±0.00
ENSMUSG00000031930 ENSMUST00000166615 10.147±2.16 8.783±2.85 7.476±0.21 11.197±2.71 10.830±2.23 24.598±8.35 5.103±0.81 17.146±1.25 7.359±1.82 16.312±1.25 2.683±0.51 17.478±3.30 9.716±2.82 13.708±9.51
ENSMUSG00000059775 ENSMUST00000077208 30.947±14.33 7.510±1.31 1.928±0.90 35.149±42.20 13.254±2.14 14.245±0.98 6.150±0.00 10.263±2.92 6.201±4.68 8.243±0.05 0.442±0.11 14.766±14.03 1.160±0.66 27.067±21.46

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