C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 18 open reading frame 21
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000141428 C18orf21 9606 + 18:35972083-35979286 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000269194 C18orf21-004 35972634-35978939 protein_coding
  ENST00000333234 C18orf21-002 35972785-35979278 protein_coding
  ENST00000587719 C18orf21-003 35972681-35973340 retained_intron
  ENST00000587873 C18orf21-005 35972682-35978873 protein_coding
  ENST00000592875 C18orf21-001 35972083-35979278 protein_coding
  ENST00000593210 C18orf21-006 35972713-35973648 processed_transcript
  ENST00000610527 C18orf21-201 35972625-35979286 protein_coding
  ENST00000618334 C18orf21-202 35972625-35979286 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000269194ENST00000333234ENST00000587873ENST00000592875ENST00000610527ENST00000618334
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000269194 1.307±0.00 5.578±0.00 N/A 3.096±0.00 2.448±0.00 N/A 4.084±0.00 4.814±0.00 3.911±0.00 3.529±0.00 9.573±0.00 3.588±1.35 6.228±0.00 18.506±2.86
ENST00000333234 N/A 4.132±0.00 0.488±0.00 1.802±0.54 1.427±0.28 1.874±0.00 1.042±0.56 2.131±0.00 0.655±0.11 0.450±0.00 N/A 2.576±2.23 2.572±0.81 3.073±0.00
ENST00000587873 2.393±0.00 N/A N/A N/A N/A 3.189±0.00 N/A N/A 0.504±0.00 N/A 0.632±0.00 N/A N/A N/A
ENST00000592875 N/A N/A N/A N/A N/A 0.649±0.00 0.468±0.00 0.783±0.00 0.150±0.00 0.251±0.00 1.184±0.00 1.141±0.15 1.552±0.20 N/A
ENST00000610527 1.336±0.00 N/A N/A 2.000±0.00 1.572±0.00 1.752±0.00 N/A N/A 0.273±0.00 N/A N/A 2.709±0.00 N/A 6.516±0.00
ENST00000618334 0.779±0.00 N/A N/A N/A 1.361±0.32 1.305±0.00 0.673±0.00 1.327±0.00 1.455±0.00 1.567±0.24 4.841±0.00 N/A N/A 3.895±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00002F CIL_00002F_0001 CGP 18:35581117-35979286
CIL_0003W5 CIL_0003W5_0001 CGP 18:35972083-36067576

Gene Ontology

No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070413 C19H18orf21 (1 of 2) chromosome 18 open reading frame 21 protein_coding Danio_rerio
ENSDARG00000077407 C19H18orf21 (2 of 2) chromosome 18 open reading frame 21 protein_coding Danio_rerio
ENSMUSG00000024273 2700062C07Rik RIKEN cDNA 2700062C07 gene protein_coding Mus_musculus

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