C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proline, glutamate and leucine rich protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000141456 PELP1 9606 - 17:4671385-4704337 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000301396 PELP1-201 4671385-4704337 protein_coding
  ENST00000436683 PELP1-202 4671385-4704337 protein_coding
  ENST00000570387 PELP1-008 4676470-4691825 protein_coding
  ENST00000570571 PELP1-011 4675314-4704040 protein_coding
  ENST00000570823 PELP1-010 4683034-4704129 processed_transcript
  ENST00000571170 PELP1-009 4682725-4691214 retained_intron
  ENST00000571347 PELP1-005 4691002-4704129 retained_intron
  ENST00000572293 PELP1-001 4671385-4704325 protein_coding
  ENST00000573242 PELP1-014 4672858-4673535 retained_intron
  ENST00000573506 PELP1-012 4675679-4676244 retained_intron
  ENST00000573523 PELP1-004 4671388-4704111 retained_intron
  ENST00000574876 PELP1-015 4671385-4704129 protein_coding
  ENST00000575101 PELP1-006 4676786-4704106 protein_coding
  ENST00000575329 PELP1-003 4671416-4704124 nonsense_mediated_decay
  ENST00000575534 PELP1-013 4674657-4675518 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000436683ENST00000573242ENST00000573506ENST00000573523ENST00000574876ENST00000575329ENST00000575534
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000436683 N/A N/A 0.053±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573242 N/A N/A 0.515±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.161±0.00 N/A N/A
ENST00000573523 N/A N/A N/A N/A N/A N/A N/A N/A 0.535±0.00 N/A N/A N/A N/A 2.855±0.00
ENST00000574876 11.947±0.00 16.963±0.00 0.154±0.00 29.368±0.00 6.169±5.85 9.903±0.00 6.874±0.00 8.877±0.00 5.595±0.00 4.038±3.88 26.694±0.00 18.979±13.08 10.738±3.42 27.470±16.76
ENST00000575329 N/A N/A 0.054±0.00 N/A N/A N/A 0.811±0.51 N/A 0.314±0.00 N/A N/A 3.265±0.00 N/A N/A
ENST00000575534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.420±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RX CIL_0001RX_0001 CGP 17:4630902-4704337
CIL_0001PS CIL_0001PS_0001 CGP 17:4671385-4721499

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003682 IDA chromatin binding
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0008134 IPI transcription factor binding
GO:0016020 IDA membrane
GO:0035327 IDA transcriptionally active chromatin
GO:0044822 IDA poly(A) RNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0071339 IDA MLL1 complex
GO:0071391 IDA cellular response to estrogen stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079313 PELP1 proline, glutamate and leucine rich protein 1 protein_coding Danio_rerio
ENSMUSG00000018921 Pelp1 proline, glutamic acid and leucine rich protein 1 protein_coding Mus_musculus

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