C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001PS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000141456-ENSG00000141480 CGP 9606 17:4671385-4721499
GeneTranscriptPositionBiotype
ENSG00000141480 (ARRB2)
arrestin, beta 2 		ENST00000269260 (ARRB2-002) 4710489-4721471 protein_coding
ENST00000346341 (ARRB2-001) 4710634-4721499 protein_coding
ENST00000381488 (ARRB2-009) 4710693-4721061 protein_coding
ENST00000412477 (ARRB2-006) 4710693-4721496 protein_coding
ENST00000570718 (ARRB2-012) 4710632-4716539 processed_transcript
ENST00000570739 (ARRB2-011) 4710632-4717941 processed_transcript
ENST00000571206 (ARRB2-008) 4715589-4721138 protein_coding
ENST00000571428 (ARRB2-020) 4710697-4719418 protein_coding
ENST00000571791 (ARRB2-014) 4710682-4717062 retained_intron
ENST00000572457 (ARRB2-003) 4710643-4721482 protein_coding
ENST00000572497 (ARRB2-016) 4710691-4716515 nonsense_mediated_decay
ENST00000572782 (ARRB2-015) 4714551-4716002 retained_intron
ENST00000573886 (ARRB2-018) 4710691-4718370 retained_intron
ENST00000574502 (ARRB2-010) 4710596-4719413 nonsense_mediated_decay
ENST00000574888 (ARRB2-013) 4710655-4716473 retained_intron
ENST00000574954 (ARRB2-004) 4710630-4721096 protein_coding
ENST00000575131 (ARRB2-017) 4710661-4717379 retained_intron
ENST00000575877 (ARRB2-007) 4710699-4721496 protein_coding
ENST00000576235 (ARRB2-021) 4710724-4720407 nonsense_mediated_decay
ENST00000577054 (ARRB2-019) 4717436-4718149 retained_intron
CIL_0001PS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018921-ENSMUSG00000060216 CGP 10090 11:70392883-70440828
GeneTranscriptPositionBiotype
ENSMUSG00000018921 (Pelp1)
proline, glutamic acid and leucine rich protein 1 		ENSMUST00000019065 (Pelp1-001) 70392883-70410028 protein_coding
ENSMUST00000135148 (Pelp1-002) 70402631-70410031 protein_coding
ENSMUSG00000060216 (Arrb2)
arrestin, beta 2 		ENSMUST00000079056 (Arrb2-005) 70432645-70440828 protein_coding
ENSMUST00000084954 (Arrb2-006) 70432637-70440674 protein_coding
ENSMUST00000102563 (Arrb2-001) 70432698-70440823 protein_coding
ENSMUST00000102564 (Arrb2-007) 70432653-70440794 protein_coding
ENSMUST00000108568 (Arrb2-013) 70432637-70440674 protein_coding
ENSMUST00000124112 (Arrb2-008) 70432635-70435996 retained_intron
ENSMUST00000124943 (Arrb2-009) 70432677-70437605 protein_coding
ENSMUST00000125441 (Arrb2-004) 70436903-70438722 retained_intron
ENSMUST00000128748 (Arrb2-011) 70432682-70438747 nonsense_mediated_decay
ENSMUST00000138006 (Arrb2-012) 70436699-70440233 retained_intron
ENSMUST00000143232 (Arrb2-002) 70437292-70439553 retained_intron
ENSMUST00000144454 (Arrb2-003) 70438582-70440228 retained_intron
ENSMUST00000150076 (Arrb2-010) 70432682-70436752 protein_coding
ENSMUSG00000080814 (Gm12314)
predicted gene 12314 		ENSMUST00000118104 (Gm12314-001) 70429017-70429554 processed_pseudogene
ENSMUSG00000082370 (Gm12313)
predicted gene 12313 		ENSMUST00000121347 (Gm12313-001) 70426553-70426973 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001PS_0001ENSG00000141480ENST00000269260ENST00000346341ENST00000381488ENST00000412477ENST00000570718ENST00000570739ENST00000571206ENST00000571428ENST00000571791ENST00000572457ENST00000572497ENST00000572782ENST00000573886ENST00000574502ENST00000574888ENST00000574954ENST00000575131ENST00000575877ENST00000576235ENST00000577054CIL_0001PS_0002ENSMUSG00000018921ENSMUST00000019065ENSMUST00000135148ENSMUSG00000060216ENSMUST00000079056ENSMUST00000084954ENSMUST00000102563ENSMUST00000102564ENSMUST00000108568ENSMUST00000124112ENSMUST00000124943ENSMUST00000125441ENSMUST00000128748ENSMUST00000138006ENSMUST00000143232ENSMUST00000144454ENSMUST00000150076ENSMUSG00000080814ENSMUST00000118104ENSMUSG00000082370ENSMUST00000121347
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001PS_0001ENSG00000141480ENST00000269260ENST00000346341ENST00000381488ENST00000412477ENST00000571206ENST00000571428ENST00000572457ENST00000574954ENST00000575131ENST00000575877ENST00000577054CIL_0001PS_0002ENSMUSG00000018921ENSMUST00000019065ENSMUST00000135148ENSMUSG00000060216ENSMUST00000079056ENSMUST00000102563ENSMUST00000102564ENSMUST00000108568ENSMUST00000124943ENSMUST00000125441ENSMUST00000128748ENSMUST00000138006ENSMUST00000143232ENSMUST00000144454ENSMUST00000150076ENSMUSG00000080814ENSMUST00000118104ENSMUSG00000082370ENSMUST00000121347
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000141480 ENST00000269260 5.518±0.00 N/A N/A N/A 3.724±0.00 N/A 0.091±0.00 N/A N/A N/A N/A 9.838±5.16 5.951±0.37 3.684±0.00
ENST00000346341 5.564±0.00 N/A N/A 9.583±0.00 N/A N/A N/A N/A N/A N/A N/A 4.516±0.00 N/A N/A
ENST00000381488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.507±0.00 N/A 2.659±0.00
ENST00000412477 N/A N/A N/A N/A N/A N/A 2.965±0.00 2.257±0.00 4.006±0.00 N/A 4.352±0.00 10.134±0.97 6.949±3.71 2.247±0.00
ENST00000570718 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571206 N/A N/A N/A N/A 1.466±0.00 N/A 0.218±0.00 N/A N/A 0.959±0.00 N/A N/A N/A N/A
ENST00000571428 N/A N/A 2.124±0.00 N/A N/A N/A 0.431±0.00 N/A 0.850±0.00 N/A N/A 12.320±0.00 10.691±0.00 N/A
ENST00000571791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572457 16.858±0.00 29.989±0.00 0.797±0.00 14.514±11.10 7.874±5.67 17.449±0.00 9.113±0.00 10.424±0.00 5.759±4.60 42.437±0.00 6.010±0.00 4.778±0.00 19.894±2.35 8.244±0.00
ENST00000572497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574502 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574954 N/A N/A N/A 2.773±0.00 N/A N/A N/A N/A N/A 0.928±0.00 N/A N/A 7.223±0.91 N/A
ENST00000575131 N/A N/A 1.482±0.00 N/A N/A N/A N/A N/A 1.506±0.00 N/A N/A N/A N/A N/A
ENST00000575877 N/A N/A N/A N/A N/A N/A 0.170±0.00 N/A N/A N/A 2.524±0.00 3.096±2.72 5.946±0.00 N/A
ENST00000576235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577054 N/A N/A N/A N/A N/A 0.466±0.00 N/A N/A N/A 2.207±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018921 ENSMUST00000019065 9.776±1.17 10.816±1.46 6.115±0.55 12.154±1.23 7.759±2.05 6.483±1.11 4.176±0.66 4.891±0.35 5.847±3.19 7.273±0.58 5.290±0.54 14.924±2.81 15.941±10.38 21.501±9.13
ENSMUST00000135148 N/A 15.790±2.24 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000060216 ENSMUST00000079056 N/A 1.577±0.28 N/A N/A N/A 1.174±0.12 1.322±0.00 N/A N/A N/A N/A 2.492±0.76 N/A 1.165±0.00
ENSMUST00000084954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000102563 3.003±0.00 1.861±0.59 N/A 4.144±0.19 8.634±2.85 1.599±0.24 1.256±0.20 1.764±0.78 3.016±1.68 4.413±0.47 N/A 2.622±0.71 1.009±0.00 0.955±0.00
ENSMUST00000102564 4.637±1.64 2.128±0.33 3.923±0.14 8.120±0.13 5.095±2.46 1.387±0.49 1.416±0.51 3.222±1.26 5.892±4.00 5.292±0.88 2.700±1.17 3.990±3.28 3.707±1.78 0.775±0.27
ENSMUST00000108568 3.087±0.51 1.516±0.57 1.935±0.47 8.582±3.21 6.091±2.21 1.205±0.18 1.088±0.29 1.219±0.22 3.515±2.53 3.643±0.13 0.948±0.39 3.653±3.32 2.277±0.96 0.548±0.10
ENSMUST00000124112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124943 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.491±1.53 0.579±0.00
ENSMUST00000125441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.110±0.00 N/A N/A
ENSMUST00000128748 N/A 2.978±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138006 5.083±1.45 3.251±0.19 N/A 5.609±0.12 N/A 2.423±0.42 1.452±0.41 N/A 0.873±0.00 6.416±0.76 N/A 2.497±0.33 N/A N/A
ENSMUST00000143232 9.824±3.38 5.219±0.15 N/A N/A 15.058±2.26 5.526±1.21 3.600±0.00 5.228±0.45 3.660±1.58 N/A N/A 9.715±2.72 N/A 2.426±0.03
ENSMUST00000144454 N/A 5.757±0.00 N/A N/A N/A 5.438±0.45 N/A 4.767±0.52 3.444±1.00 N/A N/A N/A N/A N/A
ENSMUST00000150076 N/A N/A N/A 41.519±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000080814 ENSMUST00000118104 N/A N/A N/A 0.047±0.03 N/A N/A N/A N/A 0.099±0.06 N/A N/A N/A 0.023±0.01 N/A
ENSMUSG00000082370 ENSMUST00000121347 0.128±0.00 N/A N/A 0.058±0.00 N/A N/A N/A N/A 0.054±0.03 N/A N/A N/A 0.295±0.34 0.124±0.00

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