C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SH3 and cysteine rich domain 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000141750 STAC2 9606 - 17:39210536-39225872 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000333461 STAC2-001 39210536-39225872 protein_coding
  ENST00000584501 STAC2-002 39211241-39225668 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000333461ENST00000584501
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000333461 0.451±0.00 0.322±0.00 0.116±0.00 7.102±6.09 2.608±2.15 0.516±0.00 0.422±0.00 3.775±0.00 0.022±0.00 1.173±0.00 N/A 0.962±0.86 0.606±0.24 1.077±0.00
ENST00000584501 N/A 0.233±0.00 0.231±0.00 0.657±0.00 0.787±0.00 0.506±0.00 N/A N/A 0.064±0.06 0.013±0.00 0.353±0.00 0.109±0.03 0.241±0.00 0.144±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SN CIL_0008SN_0001 VISTA 17:39110111-39710718
CIL_0006QM CIL_0006QM_0001 CGP 17:39200283-39225872
CIL_0007D5 CIL_0007D5_0001 CGP 17:39210536-39402523

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0035556 IEA intracellular signal transduction
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000017400 Stac2 SH3 and cysteine rich domain 2 protein_coding Mus_musculus

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