C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006QM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000108298-ENSG00000141750 CGP 9606 17:39200283-39225872
GeneTranscriptPositionBiotype
ENSG00000108298 (RPL19)
ribosomal protein L19 		ENST00000225430 (RPL19-001) 39200283-39204727 protein_coding
ENST00000577741 (RPL19-004) 39202042-39204648 retained_intron
ENST00000577759 (RPL19-008) 39204164-39204727 retained_intron
ENST00000579260 (RPL19-002) 39200342-39204711 protein_coding
ENST00000579374 (RPL19-006) 39200316-39204727 protein_coding
ENST00000580333 (RPL19-005) 39200317-39202753 retained_intron
ENST00000582193 (RPL19-003) 39200345-39204720 protein_coding
ENST00000585199 (RPL19-007) 39201132-39203079 protein_coding
ENSG00000141750 (STAC2)
SH3 and cysteine rich domain 2 		ENST00000333461 (STAC2-001) 39210536-39225872 protein_coding
ENST00000584501 (STAC2-002) 39211241-39225668 nonsense_mediated_decay
CIL_0006QM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000017404-ENSMUSG00000017400 CGP 10090 11:98026710-98053462
GeneTranscriptPositionBiotype
ENSMUSG00000017400 (Stac2)
SH3 and cysteine rich domain 2 		ENSMUST00000017544 (Stac2-001) 98036623-98053462 protein_coding
ENSMUST00000131519 (Stac2-002) 98040098-98043542 protein_coding
ENSMUSG00000017404 (Rpl19)
ribosomal protein L19 		ENSMUST00000017548 (Rpl19-001) 98026924-98030492 protein_coding
ENSMUST00000092425 (Rpl19-002) 98026710-98030492 protein_coding
ENSMUST00000134435 (Rpl19-003) 98026957-98028147 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006QM_0001ENSG00000108298ENST00000225430ENST00000577741ENST00000577759ENST00000579260ENST00000579374ENST00000580333ENST00000582193ENST00000585199ENSG00000141750ENST00000333461ENST00000584501CIL_0006QM_0002ENSMUSG00000017400ENSMUST00000017544ENSMUST00000131519ENSMUSG00000017404ENSMUST00000017548ENSMUST00000092425ENSMUST00000134435
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006QM_0001ENSG00000108298ENST00000225430ENST00000579374ENSG00000141750ENST00000333461ENST00000584501CIL_0006QM_0002ENSMUSG00000017400ENSMUST00000017544ENSMUST00000131519ENSMUSG00000017404ENSMUST00000017548ENSMUST00000092425ENSMUST00000134435
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108298 ENST00000225430 302.245±0.00 320.997±0.00 55.350±0.00 100.059±9.02 188.147±72.17 195.334±14.80 50.465±0.83 79.800±16.59 141.889±0.00 101.291±0.00 125.792±2.63 458.263±193.25 247.500±97.50 141.173±44.02
ENST00000577741 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579374 438.141±0.00 769.403±0.00 49.184±0.00 112.794±37.21 225.870±86.09 411.873±314.11 145.809±98.61 333.879±181.39 272.145±140.00 643.556±561.00 453.437±368.67 1330.477±1055.11 1075.127±514.72 343.064±100.03
ENST00000580333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000141750 ENST00000333461 0.451±0.00 0.322±0.00 0.116±0.00 7.102±6.09 2.608±2.15 0.516±0.00 0.422±0.00 3.775±0.00 0.022±0.00 1.173±0.00 N/A 0.962±0.86 0.606±0.24 1.077±0.00
ENST00000584501 N/A 0.233±0.00 0.231±0.00 0.657±0.00 0.787±0.00 0.506±0.00 N/A N/A 0.064±0.06 0.013±0.00 0.353±0.00 0.109±0.03 0.241±0.00 0.144±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017400 ENSMUST00000017544 0.755±0.28 0.274±0.11 0.100±0.04 3.878±3.95 1.847±0.60 0.253±0.09 0.078±0.06 0.073±0.06 0.014±0.01 0.343±0.10 0.097±0.10 0.235±0.09 0.420±0.29 2.747±1.13
ENSMUST00000131519 N/A N/A N/A N/A N/A N/A N/A N/A 0.075±0.00 N/A 0.095±0.00 N/A N/A N/A
ENSMUSG00000017404 ENSMUST00000017548 309.253±121.91 103.315±11.73 765.456±39.85 310.762±162.10 209.450±64.51 277.704±80.76 146.114±23.24 255.621±36.79 432.483±345.96 221.931±16.69 209.982±19.06 409.588±127.22 511.027±330.78 89.860±31.50
ENSMUST00000092425 N/A 88.487±38.45 N/A N/A N/A N/A N/A N/A N/A N/A N/A 318.683±118.22 125.005±0.00 13.740±0.00
ENSMUST00000134435 N/A N/A N/A N/A N/A 378.018±26.75 N/A 210.372±0.00 N/A N/A N/A 470.555±51.34 N/A N/A

Loading