C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007D5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000141750-ENSG00000108306 CGP 9606 17:39210536-39402523
GeneTranscriptPositionBiotype
ENSG00000108306 (FBXL20)
F-box and leucine-rich repeat protein 20 		ENST00000264658 (FBXL20-001) 39252644-39401663 protein_coding
ENST00000394294 (FBXL20-002) 39260587-39401623 protein_coding
ENST00000577399 (FBXL20-004) 39261460-39402523 protein_coding
ENST00000581781 (FBXL20-005) 39263876-39270810 protein_coding
ENST00000583610 (FBXL20-003) 39259131-39401656 protein_coding
ENSG00000141750 (STAC2)
SH3 and cysteine rich domain 2 		ENST00000333461 (STAC2-001) 39210536-39225872 protein_coding
ENST00000584501 (STAC2-002) 39211241-39225668 nonsense_mediated_decay
ENSG00000266469 (CTB-131K11.1)
 ENST00000582842 (CTB-131K11.1-001) 39401793-39406233 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0007D5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000017400-ENSMUSG00000020883 CGP 10090 11:98036623-98150403
GeneTranscriptPositionBiotype
ENSMUSG00000017400 (Stac2)
SH3 and cysteine rich domain 2 		ENSMUST00000017544 (Stac2-001) 98036623-98053462 protein_coding
ENSMUST00000131519 (Stac2-002) 98040098-98043542 protein_coding
ENSMUSG00000020883 (Fbxl20)
F-box and leucine-rich repeat protein 20 		ENSMUST00000103143 (Fbxl20-001) 98082556-98149612 protein_coding
ENSMUST00000135969 (Fbxl20-002) 98091091-98149606 retained_intron
ENSMUST00000146399 (Fbxl20-004) 98101739-98128963 processed_transcript
ENSMUST00000147971 (Fbxl20-007) 98095269-98100063 protein_coding
ENSMUST00000148473 (Fbxl20-006) 98127983-98128947 processed_transcript
ENSMUST00000149327 (Fbxl20-005) 98109518-98128963 protein_coding
ENSMUST00000150378 (Fbxl20-003) 98098422-98150403 protein_coding
ENSMUSG00000084079 (Gm11631)
predicted gene 11631 		ENSMUST00000119220 (Gm11631-001) 98063888-98064043 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007D5_0001ENSG00000108306ENST00000264658ENST00000394294ENST00000577399ENST00000581781ENST00000583610ENSG00000141750ENST00000333461ENST00000584501ENSG00000266469ENST00000582842CIL_0007D5_0002ENSMUSG00000017400ENSMUST00000017544ENSMUST00000131519ENSMUSG00000020883ENSMUST00000103143ENSMUST00000135969ENSMUST00000146399ENSMUST00000147971ENSMUST00000148473ENSMUST00000149327ENSMUST00000150378ENSMUSG00000084079ENSMUST00000119220
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007D5_0001ENSG00000108306ENST00000264658ENST00000394294ENST00000583610ENSG00000141750ENST00000333461ENST00000584501ENSG00000266469ENST00000582842CIL_0007D5_0002ENSMUSG00000017400ENSMUST00000017544ENSMUST00000131519ENSMUSG00000020883ENSMUST00000103143ENSMUST00000135969ENSMUSG00000084079ENSMUST00000119220
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108306 ENST00000264658 2.714±0.00 1.793±0.00 1.486±0.00 2.687±0.62 2.465±0.39 1.574±0.28 1.096±0.73 0.947±0.06 1.272±1.14 0.883±0.43 0.985±0.00 1.357±0.31 0.396±0.27 2.551±0.20
ENST00000394294 N/A N/A N/A N/A N/A 1.013±0.00 1.164±0.00 1.583±0.00 N/A N/A 1.253±0.00 2.081±0.00 1.646±0.01 4.377±0.00
ENST00000577399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583610 N/A N/A N/A 2.598±0.00 N/A N/A N/A N/A N/A 1.889±0.00 N/A N/A N/A N/A
ENSG00000141750 ENST00000333461 0.451±0.00 0.322±0.00 0.116±0.00 7.102±6.09 2.608±2.15 0.516±0.00 0.422±0.00 3.775±0.00 0.022±0.00 1.173±0.00 N/A 0.962±0.86 0.606±0.24 1.077±0.00
ENST00000584501 N/A 0.233±0.00 0.231±0.00 0.657±0.00 0.787±0.00 0.506±0.00 N/A N/A 0.064±0.06 0.013±0.00 0.353±0.00 0.109±0.03 0.241±0.00 0.144±0.00
ENSG00000266469 ENST00000582842 N/A 6.439±0.00 1.362±0.00 0.978±0.00 N/A N/A 0.249±0.00 1.172±0.00 1.096±0.00 N/A 5.236±0.00 3.198±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017400 ENSMUST00000017544 0.755±0.28 0.274±0.11 0.100±0.04 3.878±3.95 1.847±0.60 0.253±0.09 0.078±0.06 0.073±0.06 0.014±0.01 0.343±0.10 0.097±0.10 0.235±0.09 0.420±0.29 2.747±1.13
ENSMUST00000131519 N/A N/A N/A N/A N/A N/A N/A N/A 0.075±0.00 N/A 0.095±0.00 N/A N/A N/A
ENSMUSG00000020883 ENSMUST00000103143 10.996±2.48 18.750±6.22 5.655±3.45 8.615±3.28 10.934±4.92 7.369±2.97 2.700±0.55 6.473±1.26 2.397±1.11 10.985±1.82 2.306±0.43 9.741±6.81 2.102±1.15 1.826±0.76
ENSMUST00000135969 N/A 33.404±3.62 N/A N/A N/A N/A N/A N/A 0.454±0.00 N/A 1.153±0.00 2.121±0.00 N/A 0.242±0.00
ENSMUST00000146399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148473 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000084079 ENSMUST00000119220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.662±0.00

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