C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: multivesicular body subunit 12A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000141971 MVB12A 9606 + 19:17405722-17433724 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000317040 MVB12A-001 17419081-17425339 protein_coding
  ENST00000524382 MVB12A-006 17422285-17425318 retained_intron
  ENST00000526234 MVB12A-010 17420122-17422965 retained_intron
  ENST00000528515 MVB12A-007 17420082-17424677 protein_coding
  ENST00000528604 MVB12A-012 17405741-17424989 protein_coding
  ENST00000528659 MVB12A-003 17420047-17421096 protein_coding
  ENST00000528732 MVB12A-005 17420064-17420720 retained_intron
  ENST00000528911 MVB12A-009 17405722-17423799 protein_coding
  ENST00000528997 MVB12A-004 17420048-17421046 retained_intron
  ENST00000529490 MVB12A-011 17406109-17420130 processed_transcript
  ENST00000529939 MVB12A-008 17420072-17433724 protein_coding
  ENST00000543795 MVB12A-201 17420111-17425332 protein_coding
  ENST00000594784 MVB12A-017 17422444-17425331 protein_coding
  ENST00000600514 MVB12A-016 17406145-17423799 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000317040ENST00000524382ENST00000526234ENST00000528515ENST00000528659ENST00000528997ENST00000529939ENST00000543795ENST00000594784ENST00000600514
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000317040 N/A N/A N/A N/A N/A N/A N/A 0.521±0.00 N/A N/A N/A N/A N/A
ENST00000524382 N/A 8.676±0.00 1.850±0.00 8.816±0.00 3.617±0.00 N/A N/A N/A 5.489±0.00 1.451±0.00 25.295±16.08 27.487±1.52 N/A
ENST00000526234 N/A N/A 0.853±0.00 0.757±0.00 N/A N/A N/A N/A N/A N/A 4.893±0.00 N/A N/A
ENST00000528515 13.978±0.00 N/A N/A 12.488±0.00 6.308±0.00 N/A N/A N/A N/A 2.573±1.93 17.940±0.00 13.114±0.00 N/A
ENST00000528659 N/A N/A N/A 2.324±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528997 N/A N/A N/A N/A 1.521±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529939 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.366±0.00 N/A N/A N/A
ENST00000543795 16.020±0.00 8.972±0.00 5.739±0.00 6.848±6.20 9.866±0.00 5.326±0.00 8.541±7.49 10.547±0.00 12.965±0.00 11.857±0.00 16.729±11.68 14.977±4.23 7.579±2.77
ENST00000594784 22.768±0.00 18.810±0.00 N/A 13.737±0.00 7.774±0.00 N/A 12.690±0.00 N/A N/A N/A N/A N/A 14.313±0.00
ENST00000600514 N/A N/A N/A N/A 1.547±0.00 N/A N/A N/A 0.371±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006XA CIL_0006XA_0001 CGP 19:17402939-17433724
CIL_0006XB CIL_0006XB_0001 CGP 19:17405722-17448567

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000813 IDA ESCRT I complex
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0005856 IEA cytoskeleton
GO:0008289 IMP lipid binding
GO:0015031 IEA protein transport
GO:0016235 IDA aggresome
GO:0017124 IEA SH3 domain binding
GO:0031982 IDA vesicle
GO:0042058 IMP regulation of epidermal growth factor receptor signaling pathway
GO:0043130 IMP ubiquitin binding
GO:0043162 IC ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000031813 Mvb12a multivesicular body subunit 12A protein_coding Mus_musculus

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