C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006XA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130303-ENSG00000141971 CGP 9606 19:17402939-17433724
GeneTranscriptPositionBiotype
ENSG00000130303 (BST2)
bone marrow stromal cell antigen 2 		ENST00000252593 (BST2-001) 17402939-17405648 protein_coding
ENST00000527220 (BST2-003) 17403791-17405530 processed_transcript
ENST00000533098 (BST2-004) 17403241-17404537 retained_intron
ENSG00000141971 (MVB12A)
multivesicular body subunit 12A 		ENST00000317040 (MVB12A-001) 17419081-17425339 protein_coding
ENST00000524382 (MVB12A-006) 17422285-17425318 retained_intron
ENST00000526234 (MVB12A-010) 17420122-17422965 retained_intron
ENST00000528515 (MVB12A-007) 17420082-17424677 protein_coding
ENST00000528604 (MVB12A-012) 17405741-17424989 protein_coding
ENST00000528659 (MVB12A-003) 17420047-17421096 protein_coding
ENST00000528732 (MVB12A-005) 17420064-17420720 retained_intron
ENST00000528911 (MVB12A-009) 17405722-17423799 protein_coding
ENST00000528997 (MVB12A-004) 17420048-17421046 retained_intron
ENST00000529490 (MVB12A-011) 17406109-17420130 processed_transcript
ENST00000529939 (MVB12A-008) 17420072-17433724 protein_coding
ENST00000543795 (MVB12A-201) 17420111-17425332 protein_coding
ENST00000594784 (MVB12A-017) 17422444-17425331 protein_coding
ENST00000600514 (MVB12A-016) 17406145-17423799 protein_coding
ENSG00000254503 (CTD-2521M24.4)
 ENST00000526892 (CTD-2521M24.4-001) 17417031-17418288 processed_pseudogene
ENSG00000269053 (CTD-2521M24.8)
 ENST00000597028 (CTD-2521M24.8-001) 17419305-17419774 antisense
ENSG00000269481 (CTD-2521M24.6)
 ENST00000593957 (CTD-2521M24.6-001) 17414257-17422324 antisense
ENSG00000269640 (CTD-2521M24.9)
 ENST00000500836 (CTD-2521M24.9-002) 17405743-17415738 lincRNA
ENST00000534306 (CTD-2521M24.9-001) 17405694-17415164 lincRNA
ENST00000594426 (CTD-2521M24.9-006) 17405778-17414740 lincRNA
ENST00000594913 (CTD-2521M24.9-012) 17406115-17414347 lincRNA
ENST00000595892 (CTD-2521M24.9-003) 17405741-17413303 lincRNA
ENST00000596322 (CTD-2521M24.9-008) 17405824-17413194 lincRNA
ENST00000598356 (CTD-2521M24.9-007) 17405778-17406359 lincRNA
ENST00000598546 (CTD-2521M24.9-004) 17405744-17414449 lincRNA
ENST00000599975 (CTD-2521M24.9-013) 17406137-17418901 lincRNA
ENST00000600008 (CTD-2521M24.9-009) 17405824-17414468 lincRNA
ENST00000600369 (CTD-2521M24.9-005) 17405763-17415004 lincRNA
ENST00000601007 (CTD-2521M24.9-011) 17406104-17418904 lincRNA
ENST00000601885 (CTD-2521M24.9-010) 17405824-17414954 lincRNA
CIL_0006XA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000046718-ENSMUSG00000031813 CGP 10090 8:71534264-71548024
GeneTranscriptPositionBiotype
ENSMUSG00000031813 (Mvb12a)
multivesicular body subunit 12A 		ENSMUST00000034272 (Mvb12a-201) 71542930-71548024 protein_coding
ENSMUSG00000046718 (Bst2)
bone marrow stromal cell antigen 2 		ENSMUST00000051672 (Bst2-201) 71534264-71537437 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006XA_0001ENSG00000130303ENST00000252593ENST00000527220ENST00000533098ENSG00000141971ENST00000317040ENST00000524382ENST00000526234ENST00000528515ENST00000528604ENST00000528659ENST00000528732ENST00000528911ENST00000528997ENST00000529490ENST00000529939ENST00000543795ENST00000594784ENST00000600514ENSG00000254503ENST00000526892ENSG00000269053ENST00000597028ENSG00000269481ENST00000593957ENSG00000269640ENST00000500836ENST00000534306ENST00000594426ENST00000594913ENST00000595892ENST00000596322ENST00000598356ENST00000598546ENST00000599975ENST00000600008ENST00000600369ENST00000601007ENST00000601885CIL_0006XA_0002ENSMUSG00000031813ENSMUST00000034272ENSMUSG00000046718ENSMUST00000051672
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006XA_0001ENSG00000130303ENST00000252593ENST00000533098ENSG00000141971ENST00000317040ENST00000524382ENST00000526234ENST00000528515ENST00000528659ENST00000528997ENST00000529939ENST00000543795ENST00000594784ENST00000600514ENSG00000254503ENST00000526892ENSG00000269053ENST00000597028ENSG00000269481ENST00000593957ENSG00000269640ENST00000500836ENST00000534306ENST00000594426ENST00000594913ENST00000596322ENST00000598356ENST00000598546ENST00000599975ENST00000600369CIL_0006XA_0002ENSMUSG00000031813ENSMUST00000034272ENSMUSG00000046718ENSMUST00000051672
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130303 ENST00000252593 190.404±0.00 159.416±0.00 7.916±0.00 10.355±6.43 75.855±60.02 83.507±74.58 15.968±11.31 56.996±8.48 38.039±27.27 86.770±61.67 10.329±6.76 302.500±312.14 244.649±63.19 89.874±61.52
ENST00000527220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.629±0.00 N/A N/A
ENSG00000141971 ENST00000317040 N/A N/A N/A N/A N/A N/A N/A N/A 0.521±0.00 N/A N/A N/A N/A N/A
ENST00000524382 N/A 8.676±0.00 N/A 1.850±0.00 8.816±0.00 3.617±0.00 N/A N/A N/A 5.489±0.00 1.451±0.00 25.295±16.08 27.487±1.52 N/A
ENST00000526234 N/A N/A N/A 0.853±0.00 0.757±0.00 N/A N/A N/A N/A N/A N/A 4.893±0.00 N/A N/A
ENST00000528515 13.978±0.00 N/A N/A N/A 12.488±0.00 6.308±0.00 N/A N/A N/A N/A 2.573±1.93 17.940±0.00 13.114±0.00 N/A
ENST00000528604 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528659 N/A N/A N/A N/A 2.324±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528911 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528997 N/A N/A N/A N/A N/A 1.521±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529490 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.366±0.00 N/A N/A N/A
ENST00000543795 16.020±0.00 8.972±0.00 N/A 5.739±0.00 6.848±6.20 9.866±0.00 5.326±0.00 8.541±7.49 10.547±0.00 12.965±0.00 11.857±0.00 16.729±11.68 14.977±4.23 7.579±2.77
ENST00000594784 22.768±0.00 18.810±0.00 N/A N/A 13.737±0.00 7.774±0.00 N/A 12.690±0.00 N/A N/A N/A N/A N/A 14.313±0.00
ENST00000600514 N/A N/A N/A N/A N/A 1.547±0.00 N/A N/A N/A 0.371±0.00 N/A N/A N/A N/A
ENSG00000254503 ENST00000526892 0.349±0.00 0.598±0.00 N/A 0.230±0.00 0.251±0.00 0.309±0.00 0.227±0.19 0.129±0.00 0.091±0.01 0.329±0.00 0.283±0.00 0.202±0.09 0.146±0.04 1.049±0.70
ENSG00000269053 ENST00000597028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.233±0.00 N/A N/A
ENSG00000269481 ENST00000593957 N/A N/A 0.289±0.00 N/A N/A N/A N/A N/A 1.098±0.00 0.252±0.00 N/A N/A N/A 1.396±0.00
ENSG00000269640 ENST00000500836 N/A 4.473±0.00 N/A N/A N/A 0.997±0.00 0.720±0.50 2.158±0.00 1.873±0.00 1.513±0.00 N/A 5.256±1.03 3.453±0.00 2.124±0.72
ENST00000534306 N/A N/A 0.140±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000594426 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.198±0.00 N/A N/A N/A N/A
ENST00000594913 N/A N/A N/A N/A N/A N/A 0.305±0.00 1.658±0.00 N/A N/A N/A 0.668±0.00 N/A N/A
ENST00000595892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596322 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.744±0.00 N/A N/A N/A N/A
ENST00000598356 N/A N/A N/A N/A N/A N/A 0.449±0.00 N/A N/A 0.495±0.00 N/A N/A N/A N/A
ENST00000598546 N/A N/A N/A N/A N/A N/A 0.548±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000599975 N/A N/A N/A N/A N/A N/A N/A N/A 1.593±0.00 N/A N/A N/A N/A N/A
ENST00000600008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600369 N/A N/A 0.121±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031813 ENSMUST00000034272 38.328±12.14 71.088±8.76 42.845±6.64 17.620±2.79 41.857±14.79 78.543±4.80 14.414±2.89 56.280±6.35 38.049±15.78 47.583±5.83 9.730±1.25 70.069±21.88 50.388±8.68 24.180±2.79
ENSMUSG00000046718 ENSMUST00000051672 177.284±104.25 192.661±4.76 50.481±1.95 4.242±1.25 174.290±81.08 69.061±7.95 33.574±9.01 69.889±23.11 174.331±148.33 205.330±41.56 7.461±1.78 569.817±253.54 177.583±67.35 6.309±2.75

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