C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: multivesicular body subunit 12A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000543795 MVB12A-201 ENSG00000141971 9606 + 19:17420111-17425332 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000543795
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000543795 16.020±0.00 8.972±0.00 5.739±0.00 6.848±6.20 9.866±0.00 5.326±0.00 8.541±7.49 10.547±0.00 12.965±0.00 11.857±0.00 16.729±11.68 14.977±4.23 7.579±2.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006XA CIL_0006XA_0001 CGP 19:17402939-17433724
CIL_0006XB CIL_0006XB_0001 CGP 19:17405722-17448567

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000813 IDA ESCRT I complex
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0005856 IEA cytoskeleton
GO:0008289 IMP lipid binding
GO:0015031 IEA protein transport
GO:0016235 IDA aggresome
GO:0017124 IEA SH3 domain binding
GO:0031982 IDA vesicle
GO:0042058 IMP regulation of epidermal growth factor receptor signaling pathway
GO:0043130 IMP ubiquitin binding
GO:0043162 IC ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034272 Mvb12a-201 protein_coding Mus_musculus 0 743

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