C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 19 open reading frame 52
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000142444 C19orf52 9606 + 19:10928733-10933535 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000270502 C19orf52-001 10928733-10930254 protein_coding
  ENST00000588807 C19orf52-002 10929621-10933515 nonsense_mediated_decay
  ENST00000593162 C19orf52-003 10932068-10933535 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000270502ENST00000588807ENST00000593162
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000270502 5.924±0.00 6.317±0.00 0.584±0.00 5.919±3.06 3.963±3.60 4.669±1.96 2.863±2.30 9.491±0.00 3.607±1.08 5.464±4.15 10.970±0.00 6.038±2.61 8.416±1.49 7.477±0.67
ENST00000588807 0.827±0.00 N/A 1.489±0.00 1.151±0.00 0.739±0.20 1.888±0.00 0.611±0.00 N/A 1.972±0.00 N/A 2.696±0.00 1.271±0.00 N/A 2.887±0.00
ENST00000593162 1.613±0.00 4.213±0.00 N/A 2.119±0.00 2.725±0.00 N/A 1.121±0.00 4.264±0.00 1.872±0.00 N/A N/A 1.471±0.00 1.794±0.00 1.653±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ZU CIL_0004ZU_0002 CGP 19:10922185-10933535
CIL_0002S7 CIL_0002S7_0001 CGP 19:10928733-11065395

Gene Ontology

No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037909 C3H19orf52 chromosome 19 open reading frame 52 protein_coding Danio_rerio
ENSMUSG00000048429 1810026J23Rik RIKEN cDNA 1810026J23 gene protein_coding Mus_musculus

Loading