C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004ZU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000021399-ENSDARG00000037909 CGP 7955 3:34259300-34267883
GeneTranscriptPositionBiotype
ENSDARG00000021399 (yipf2)
Yip1 domain family, member 2 		ENSDART00000003133 (yipf2-001) 34259300-34265760 protein_coding
ENSDART00000151555 (yipf2-004) 34265103-34265728 retained_intron
ENSDART00000151676 (yipf2-002) 34265130-34265747 retained_intron
ENSDART00000151819 (yipf2-003) 34262343-34265660 protein_coding
ENSDARG00000037909 (C3H19orf52)
chromosome 19 open reading frame 52 		ENSDART00000055252 (C3H19orf52-001) 34266131-34267883 protein_coding
CIL_0004ZU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130733-ENSG00000142444 CGP 9606 19:10922185-10933535
GeneTranscriptPositionBiotype
ENSG00000130733 (YIPF2)
Yip1 domain family, member 2 		ENST00000253031 (YIPF2-001) 10922185-10928681 protein_coding
ENST00000585858 (YIPF2-003) 10923837-10928650 protein_coding
ENST00000586575 (YIPF2-012) 10923352-10928657 protein_coding
ENST00000586748 (YIPF2-002) 10922768-10928653 protein_coding
ENST00000587943 (YIPF2-004) 10923496-10928625 protein_coding
ENST00000588347 (YIPF2-006) 10923833-10928512 protein_coding
ENST00000588962 (YIPF2-011) 10923842-10928550 retained_intron
ENST00000589971 (YIPF2-009) 10922835-10924147 protein_coding
ENST00000590329 (YIPF2-007) 10923272-10928585 protein_coding
ENST00000591872 (YIPF2-008) 10923101-10923617 protein_coding
ENST00000592505 (YIPF2-005) 10927598-10928547 retained_intron
ENST00000592646 (YIPF2-010) 10922770-10924117 protein_coding
ENSG00000142444 (C19orf52)
chromosome 19 open reading frame 52 		ENST00000270502 (C19orf52-001) 10928733-10930254 protein_coding
ENST00000588807 (C19orf52-002) 10929621-10933515 nonsense_mediated_decay
ENST00000593162 (C19orf52-003) 10932068-10933535 processed_transcript
ENSG00000142453 (CARM1)
coactivator-associated arginine methyltransferase 1 		ENST00000327064 (CARM1-002) 10871513-10923070 protein_coding
ENST00000344150 (CARM1-003) 10871703-10922721 protein_coding
ENST00000586221 (CARM1-001) 10871828-10922777 nonsense_mediated_decay
ENST00000586298 (CARM1-010) 10919929-10921900 protein_coding
ENST00000586508 (CARM1-006) 10918986-10920870 retained_intron
ENST00000588947 (CARM1-008) 10871596-10909136 protein_coding
ENST00000589693 (CARM1-005) 10871910-10913931 nonsense_mediated_decay
ENST00000590039 (CARM1-009) 10871853-10912252 nonsense_mediated_decay
ENST00000590699 (CARM1-004) 10871673-10921771 nonsense_mediated_decay
ENST00000592516 (CARM1-007) 10920667-10921934 retained_intron
CIL_0004ZU_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032182-ENSMUSG00000048429 CGP 10090 9:21588709-21595970
GeneTranscriptPositionBiotype
ENSMUSG00000032182 (Yipf2)
Yip1 domain family, member 2 		ENSMUST00000034700 (Yipf2-201) 21588709-21592831 protein_coding
ENSMUST00000078572 (Yipf2-202) 21588709-21592831 protein_coding
ENSMUST00000180365 (Yipf2-203) 21588709-21592831 protein_coding
ENSMUSG00000032185 (Carm1)
coactivator-associated arginine methyltransferase 1 		ENSMUST00000034703 (Carm1-001) 21546894-21589467 protein_coding
ENSMUST00000115394 (Carm1-005) 21546923-21589467 protein_coding
ENSMUST00000115395 (Carm1-003) 21546913-21589487 protein_coding
ENSMUST00000130032 (Carm1-002) 21546978-21589467 nonsense_mediated_decay
ENSMUST00000130100 (Carm1-009) 21587403-21588129 processed_transcript
ENSMUST00000132011 (Carm1-008) 21587218-21588200 processed_transcript
ENSMUST00000139871 (Carm1-007) 21575104-21580339 processed_transcript
ENSMUST00000147749 (Carm1-006) 21547158-21579467 processed_transcript
ENSMUST00000154049 (Carm1-004) 21546923-21589467 retained_intron
ENSMUSG00000048429 (1810026J23Rik)
RIKEN cDNA 1810026J23 gene 		ENSMUST00000062125 (1810026J23Rik-001) 21592722-21595970 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004ZU_0001ENSDARG00000021399ENSDART00000003133ENSDART00000151555ENSDART00000151676ENSDART00000151819ENSDARG00000037909ENSDART00000055252CIL_0004ZU_0002ENSG00000130733ENST00000253031ENST00000585858ENST00000586575ENST00000586748ENST00000587943ENST00000588347ENST00000588962ENST00000589971ENST00000590329ENST00000591872ENST00000592505ENST00000592646ENSG00000142444ENST00000270502ENST00000588807ENST00000593162ENSG00000142453ENST00000327064ENST00000344150ENST00000586221ENST00000586298ENST00000586508ENST00000588947ENST00000589693ENST00000590039ENST00000590699ENST00000592516CIL_0004ZU_0003ENSMUSG00000032182ENSMUST00000034700ENSMUST00000078572ENSMUST00000180365ENSMUSG00000032185ENSMUST00000034703ENSMUST00000115394ENSMUST00000115395ENSMUST00000130032ENSMUST00000130100ENSMUST00000132011ENSMUST00000139871ENSMUST00000147749ENSMUST00000154049ENSMUSG00000048429ENSMUST00000062125
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004ZU_0001ENSDARG00000021399ENSDART00000003133ENSDART00000151819ENSDARG00000037909ENSDART00000055252CIL_0004ZU_0002ENSG00000130733ENST00000253031ENST00000585858ENST00000586748ENST00000589971ENST00000592646ENSG00000142444ENST00000270502ENST00000588807ENST00000593162ENSG00000142453ENST00000327064ENST00000344150ENST00000586221ENST00000586298ENST00000586508ENST00000590699CIL_0004ZU_0003ENSMUSG00000032182ENSMUST00000034700ENSMUST00000078572ENSMUST00000180365ENSMUSG00000032185ENSMUST00000034703ENSMUST00000115395ENSMUST00000130032ENSMUST00000154049ENSMUSG00000048429ENSMUST00000062125
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000021399 ENSDART00000003133 N/A N/A N/A 13.101±3.52 N/A N/A 7.362±1.51 9.433±0.00 0.730±0.00 N/A 2.363±0.00 N/A N/A N/A
ENSDART00000151555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000151676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000151819 N/A N/A N/A N/A N/A N/A N/A N/A 0.381±0.00 N/A N/A N/A N/A N/A
ENSDARG00000037909 ENSDART00000055252 N/A N/A N/A 6.449±3.08 N/A N/A 9.668±3.39 20.624±11.64 6.241±0.00 N/A 12.819±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130733 ENST00000253031 25.513±0.00 24.005±0.00 1.168±0.00 9.747±5.67 12.544±10.04 11.808±9.81 5.219±4.31 29.563±0.00 10.367±7.85 13.979±10.54 17.645±14.24 22.174±12.29 52.012±16.73 40.569±0.53
ENST00000585858 N/A N/A 1.549±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586748 N/A N/A N/A N/A 1.543±0.00 N/A N/A 1.409±0.00 N/A N/A N/A 3.248±0.00 17.196±0.00 N/A
ENST00000587943 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589971 N/A N/A N/A N/A N/A N/A N/A 2.778±0.00 N/A N/A N/A N/A N/A N/A
ENST00000590329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592646 N/A N/A 1.475±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000142444 ENST00000270502 5.924±0.00 6.317±0.00 0.584±0.00 5.919±3.06 3.963±3.60 4.669±1.96 2.863±2.30 9.491±0.00 3.607±1.08 5.464±4.15 10.970±0.00 6.038±2.61 8.416±1.49 7.477±0.67
ENST00000588807 0.827±0.00 N/A 1.489±0.00 1.151±0.00 0.739±0.20 1.888±0.00 0.611±0.00 N/A 1.972±0.00 N/A 2.696±0.00 1.271±0.00 N/A 2.887±0.00
ENST00000593162 1.613±0.00 4.213±0.00 N/A 2.119±0.00 2.725±0.00 N/A 1.121±0.00 4.264±0.00 1.872±0.00 N/A N/A 1.471±0.00 1.794±0.00 1.653±0.00
ENSG00000142453 ENST00000327064 N/A N/A N/A N/A N/A N/A 0.197±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000344150 15.730±0.00 13.474±0.00 N/A N/A 6.435±4.62 1.965±0.00 0.609±0.00 1.066±0.00 3.878±3.00 1.055±0.00 1.602±0.00 13.311±8.67 19.050±6.64 23.163±0.00
ENST00000586221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.760±0.00 N/A N/A N/A
ENST00000586298 N/A N/A N/A 7.012±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586508 N/A N/A N/A N/A N/A N/A N/A 2.870±0.00 N/A N/A N/A N/A N/A N/A
ENST00000588947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590699 N/A N/A 0.726±0.00 N/A N/A N/A N/A N/A N/A N/A 4.641±0.00 N/A N/A N/A
ENST00000592516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032182 ENSMUST00000034700 N/A N/A 10.801±0.00 N/A N/A N/A N/A 13.674±0.55 7.139±0.26 N/A N/A N/A 13.748±3.11 N/A
ENSMUST00000078572 20.035±2.95 45.828±2.53 16.391±1.78 N/A 21.789±2.33 28.780±3.51 N/A 18.704±2.46 15.672±4.36 26.754±3.22 13.409±0.00 32.062±11.21 21.964±5.01 N/A
ENSMUST00000180365 N/A N/A N/A N/A N/A 18.907±2.89 N/A N/A N/A N/A N/A 15.969±3.81 9.961±0.00 N/A
ENSMUSG00000032185 ENSMUST00000034703 25.478±5.21 21.153±4.77 8.764±1.77 16.731±8.16 19.031±5.25 11.202±2.78 17.230±3.45 10.452±0.46 10.010±4.45 11.372±2.39 17.359±3.50 17.596±6.22 15.464±5.32 35.054±15.49
ENSMUST00000115394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000115395 10.137±0.00 N/A N/A N/A 8.133±0.11 8.871±1.58 N/A N/A N/A 8.213±0.00 N/A 13.766±1.90 11.979±4.37 N/A
ENSMUST00000130032 N/A 18.259±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.445±0.00 N/A 31.954±0.63
ENSMUST00000130100 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132011 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154049 8.437±0.00 N/A N/A N/A 8.638±0.42 6.262±0.16 N/A N/A N/A 6.829±0.37 N/A 14.810±3.58 N/A N/A
ENSMUSG00000048429 ENSMUST00000062125 25.351±7.85 57.779±7.73 19.041±0.36 31.126±14.51 31.654±4.47 18.958±2.63 27.593±1.58 24.108±1.13 20.719±4.63 21.884±2.14 29.042±3.23 31.598±7.76 17.970±4.22 6.466±0.00

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