C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: HORMA domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000143452 HORMAD1 9606 - 1:150698060-150720888 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000322343 HORMAD1-002 150698162-150720885 protein_coding
  ENST00000361824 HORMAD1-001 150698253-150720876 protein_coding
  ENST00000368987 HORMAD1-005 150706572-150720840 protein_coding
  ENST00000368995 HORMAD1-003 150698060-150720876 protein_coding
  ENST00000442853 HORMAD1-006 150706630-150720868 protein_coding
  ENST00000470397 HORMAD1-008 150698391-150704307 processed_transcript
  ENST00000476530 HORMAD1-004 150713728-150720888 processed_transcript
  ENST00000486497 HORMAD1-007 150698554-150706823 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyOvaryPlacentaTestisENST00000322343ENST00000361824ENST00000368987ENST00000442853ENST00000470397ENST00000476530ENST00000486497
Transcript ID Adrenal Breast Colon Heart Kidney Ovary Placenta Testis
ENST00000322343 N/A N/A N/A N/A N/A N/A N/A 12.028±0.00
ENST00000361824 N/A 0.049±0.00 N/A N/A N/A 1.564±0.77 0.063±0.00 20.778±6.69
ENST00000368987 N/A N/A N/A N/A N/A 0.043±0.00 0.168±0.08 38.025±0.00
ENST00000442853 N/A 0.552±0.00 N/A 0.099±0.00 0.074±0.00 N/A N/A N/A
ENST00000470397 N/A 0.092±0.00 0.164±0.00 N/A N/A N/A 0.202±0.10 N/A
ENST00000476530 0.068±0.00 N/A N/A N/A 0.059±0.02 N/A N/A N/A
ENST00000486497 0.094±0.00 N/A N/A N/A 0.041±0.00 1.192±0.74 0.136±0.02 46.580±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000794 IEA condensed nuclear chromosome
GO:0001824 ISS blastocyst development
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005694 ISS chromosome
GO:0007126 ISS meiotic nuclear division
GO:0007130 ISS synaptonemal complex assembly
GO:0007283 ISS spermatogenesis
GO:0042138 ISS meiotic DNA double-strand break formation
GO:0048477 ISS oogenesis
GO:0051177 ISS meiotic sister chromatid cohesion
GO:0051598 ISS meiotic recombination checkpoint
GO:0060629 ISS regulation of homologous chromosome segregation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040254 hormad1 HORMA domain containing 1 protein_coding Danio_rerio
ENSMUSG00000028109 Hormad1 HORMA domain containing 1 protein_coding Mus_musculus

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