C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: HORMA domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028109 Hormad1 10090 + 3:95559677-95587671 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029754 Hormad1-003 95559678-95587592 protein_coding
  ENSMUST00000090797 Hormad1-002 95559677-95587671 protein_coding
  ENSMUST00000107154 Hormad1-001 95559678-95587596 protein_coding
  ENSMUST00000128291 Hormad1-004 95559678-95585798 retained_intron
  ENSMUST00000171191 Hormad1-201 95559679-95585558 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverOvaryPlacentaTestisENSMUST00000029754ENSMUST00000090797ENSMUST00000107154ENSMUST00000171191
Transcript ID Brain Kidney Liver Ovary Placenta Testis
ENSMUST00000029754 0.011±0.00 N/A N/A N/A 0.066±0.02 4.066±0.61
ENSMUST00000090797 0.005±0.00 0.039±0.00 N/A N/A 0.032±0.00 4.256±0.80
ENSMUST00000107154 N/A N/A N/A N/A 0.023±0.00 N/A
ENSMUST00000171191 N/A N/A 0.014±0.01 0.017±0.00 0.154±0.08 12.185±3.24

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000794 IDA condensed nuclear chromosome
GO:0001824 IMP blastocyst development
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005694 IDA chromosome
GO:0005737 IEA cytoplasm
GO:0007126 IEP meiotic nuclear division
GO:0007130 IMP synaptonemal complex assembly
GO:0007283 IMP spermatogenesis
GO:0042138 IMP meiotic DNA double-strand break formation
GO:0048477 IMP oogenesis
GO:0051177 IMP meiotic sister chromatid cohesion
GO:0051598 IMP meiotic recombination checkpoint
GO:0060629 IMP regulation of homologous chromosome segregation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040254 hormad1 HORMA domain containing 1 protein_coding Danio_rerio
ENSG00000143452 HORMAD1 HORMA domain containing 1 protein_coding Homo_sapiens

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