C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HORMA domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000361824 HORMAD1-001 ENSG00000143452 9606 - 1:150698253-150720876 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastOvaryPlacentaTestisENST00000361824
Transcript ID Breast Ovary Placenta Testis
ENST00000361824 0.049±0.00 1.564±0.77 0.063±0.00 20.778±6.69

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000794 IEA condensed nuclear chromosome
GO:0001824 ISS blastocyst development
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005694 ISS chromosome
GO:0007126 ISS meiotic nuclear division
GO:0007130 ISS synaptonemal complex assembly
GO:0007283 ISS spermatogenesis
GO:0042138 ISS meiotic DNA double-strand break formation
GO:0048477 ISS oogenesis
GO:0051177 ISS meiotic sister chromatid cohesion
GO:0051598 ISS meiotic recombination checkpoint
GO:0060629 ISS regulation of homologous chromosome segregation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029754 Hormad1-003 protein_coding Mus_musculus 0 1197
ENSMUST00000171191 Hormad1-201 protein_coding Mus_musculus 0 1131
ENSMUST00000107154 Hormad1-001 protein_coding Mus_musculus 0 1131
ENSMUST00000128291 Hormad1-004 retained_intron Mus_musculus 0 1131
ENSMUST00000090797 Hormad1-002 protein_coding Mus_musculus 0 1131
ENSMUST00000121833 Gm15529-001 processed_pseudogene Mus_musculus 0 924

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