C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GA binding protein transcription factor, beta subunit 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000143458 GABPB2 9606 + 1:151070578-151125542 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000368916 GABPB2-002 151088158-151118671 protein_coding
  ENST00000368918 GABPB2-001 151070604-151125542 protein_coding
  ENST00000462520 GABPB2-004 151070578-151097915 processed_transcript
  ENST00000467551 GABPB2-003 151093246-151118495 processed_transcript
  ENST00000486076 GABPB2-005 151070804-151098002 processed_transcript
  ENST00000489549 GABPB2-006 151070777-151107177 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000368916ENST00000368918ENST00000462520ENST00000467551ENST00000489549
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000368916 N/A N/A 0.701±0.00 0.567±0.00 N/A 1.247±0.00 0.497±0.00 N/A 1.350±0.00 N/A 0.959±0.00 1.477±0.05 0.694±0.20 10.597±0.00
ENST00000368918 1.035±0.00 3.236±0.00 0.191±0.00 0.341±0.05 1.380±0.30 0.369±0.00 0.476±0.22 N/A 0.634±0.00 0.640±0.00 0.953±0.00 2.665±1.43 0.405±0.09 2.721±0.91
ENST00000462520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.761±0.00 N/A N/A N/A
ENST00000467551 N/A N/A N/A N/A N/A N/A N/A 0.637±0.00 N/A 1.102±0.00 N/A N/A N/A 7.216±0.00
ENST00000489549 N/A N/A 1.414±0.00 1.247±0.00 N/A N/A N/A N/A N/A 2.108±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0042803 IEA protein homodimerization activity
GO:0044212 IDA transcription regulatory region DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046982 IDA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000038766 Gabpb2 GA repeat binding protein, beta 2 protein_coding Mus_musculus

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