Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	GA binding protein transcription factor, beta subunit 2
ENST00000368918	GABPB2-001	ENSG00000143458	9606	+	1:151070604-151125542	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENST00000368918	1.035±0.00	3.236±0.00	0.191±0.00	0.341±0.05	1.380±0.30	0.369±0.00	0.476±0.22	0.634±0.00	0.640±0.00	0.953±0.00	2.665±1.43	0.405±0.09	2.721±0.91

Conserved Regions
Gene is not located within a conserved region.

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0005515	IEA	protein binding
GO:0005634	IDA	nucleus
GO:0006351	IEA	transcription, DNA-templated
GO:0042803	IEA	protein homodimerization activity
GO:0044212	IDA	transcription regulatory region DNA binding
GO:0045944	IDA	positive regulation of transcription from RNA polymerase II promoter
GO:0046982	IDA	protein heterodimerization activity

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000098873	Gabpb2-201	protein_coding	Mus_musculus	0	760
ENSMUST00000136139	Gabpb2-001	protein_coding	Mus_musculus	0	760
ENSMUST00000107209	Gabpb2-004	protein_coding	Mus_musculus	0	760
ENSMUST00000107204	Gabpb2-008	protein_coding	Mus_musculus	0	610
ENSMUST00000070774	Gabpb2-005	retained_intron	Mus_musculus	0	604
ENSMUST00000138862	Gabpb2-003	retained_intron	Mus_musculus	0	401
ENSMUST00000155555	Gabpb2-002	retained_intron	Mus_musculus	0	401
ENSMUST00000141645	Gabpb2-007	retained_intron	Mus_musculus	0	237
ENSMUST00000038014	Dnajc16-001	protein_coding	Mus_musculus	0.00000002	68
ENSMUST00000034431	Tmem170-201	protein_coding	Mus_musculus	0.00000008	66
ENSMUST00000173269	Neu1-002	retained_intron	Mus_musculus	0.00001	58

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