C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GA repeat binding protein, beta 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038766 Gabpb2 10090 - 3:95181766-95217916 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000070774 Gabpb2-005 95187725-95217709 retained_intron
  ENSMUST00000098873 Gabpb2-201 95181773-95208937 protein_coding
  ENSMUST00000107204 Gabpb2-008 95203013-95217754 protein_coding
  ENSMUST00000107209 Gabpb2-004 95181766-95217709 protein_coding
  ENSMUST00000136139 Gabpb2-001 95181766-95217916 protein_coding
  ENSMUST00000138862 Gabpb2-003 95199570-95217916 retained_intron
  ENSMUST00000141645 Gabpb2-007 95187589-95191898 retained_intron
  ENSMUST00000145272 Gabpb2-006 95215236-95217694 processed_transcript
  ENSMUST00000155555 Gabpb2-002 95197438-95217916 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000098873ENSMUST00000107209ENSMUST00000155555
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000098873 8.115±2.50 5.570±0.62 4.220±0.01 1.886±0.00 8.944±0.98 7.151±0.78 3.200±0.18 5.629±0.38 6.342±2.76 12.107±1.19 2.011±0.11 9.332±1.46 6.277±1.53 1.189±0.00
ENSMUST00000107209 3.177±0.00 N/A N/A N/A 3.658±0.00 1.159±0.00 N/A N/A 2.197±1.08 N/A 2.061±0.19 1.705±0.00 1.989±0.94 N/A
ENSMUST00000155555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.337±0.72 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 ISO nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0042803 IDA protein homodimerization activity
GO:0044212 ISO transcription regulatory region DNA binding
GO:0045944 ISO positive regulation of transcription from RNA polymerase II promoter
GO:0046982 ISO protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000143458 GABPB2 GA binding protein transcription factor, beta subunit 2 protein_coding Homo_sapiens

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