C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ephrin-A3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000143590 EFNA3 9606 + 1:155078872-155087538 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000368408 EFNA3-001 155078872-155087538 protein_coding
  ENST00000470294 EFNA3-003 155085516-155086982 processed_transcript
  ENST00000498667 EFNA3-002 155085522-155086923 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonLungOvaryPlacentaTestisENST00000368408ENST00000498667
Transcript ID Adrenal Bladder Brain Breast Colon Lung Ovary Placenta Testis
ENST00000368408 0.615±0.00 0.034±0.00 6.750±3.36 0.644±0.23 0.237±0.00 N/A 2.697±0.00 0.885±0.00 2.639±0.00
ENST00000498667 N/A N/A N/A N/A N/A 0.425±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000LV CIL_0000LV_0003 CGP 1:155078872-155134857

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005005 TAS transmembrane-ephrin receptor activity
GO:0005886 IBA plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0007267 TAS cell-cell signaling
GO:0007411 IBA axon guidance
GO:0016020 IEA membrane
GO:0031225 IEA anchored component of membrane
GO:0046875 IPI ephrin receptor binding
GO:0048013 ISS ephrin receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014675 efna3a ephrin A3a protein_coding Danio_rerio
ENSDARG00000032485 efna3b ephrin A3b protein_coding Danio_rerio
ENSMUSG00000028039 Efna3 ephrin A3 protein_coding Mus_musculus

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