C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ephrin-A3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000368408 EFNA3-001 ENSG00000143590 9606 + 1:155078872-155087538 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonOvaryPlacentaTestisENST00000368408
Transcript ID Adrenal Bladder Brain Breast Colon Ovary Placenta Testis
ENST00000368408 0.615±0.00 0.034±0.00 6.750±3.36 0.644±0.23 0.237±0.00 2.697±0.00 0.885±0.00 2.639±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000LV CIL_0000LV_0003 CGP 1:155078872-155134857

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005005 TAS transmembrane-ephrin receptor activity
GO:0005886 IBA plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0007267 TAS cell-cell signaling
GO:0007411 IBA axon guidance
GO:0016020 IEA membrane
GO:0031225 IEA anchored component of membrane
GO:0046875 IPI ephrin receptor binding
GO:0048013 ISS ephrin receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029673 Efna3-001 protein_coding Mus_musculus 0 1997
ENSMUST00000139439 Efna3-002 processed_transcript Mus_musculus 0 486
ENSDART00000103229 efna3b-201 protein_coding Danio_rerio 4.06377e-44 183
ENSDART00000121607 efna3b-202 protein_coding Danio_rerio 4.06377e-44 183
ENSDART00000027274 efna3a-201 protein_coding Danio_rerio 9.94922e-44 182
ENSDART00000147218 efna3a-001 protein_coding Danio_rerio 9.94922e-44 182

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