C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ADP-ribosylation factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000143761 ARF1 9606 + 1:228082660-228099212 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000272102 ARF1-001 228082660-228099212 protein_coding
  ENST00000469235 ARF1-010 228083150-228097948 processed_transcript
  ENST00000470558 ARF1-006 228082789-228098188 processed_transcript
  ENST00000470670 ARF1-003 228082730-228098027 processed_transcript
  ENST00000473546 ARF1-013 228083184-228097199 processed_transcript
  ENST00000473949 ARF1-005 228082791-228097894 processed_transcript
  ENST00000477451 ARF1-008 228083085-228097655 processed_transcript
  ENST00000478336 ARF1-007 228083137-228098122 processed_transcript
  ENST00000478424 ARF1-004 228082741-228098379 processed_transcript
  ENST00000482962 ARF1-009 228083222-228097896 processed_transcript
  ENST00000490705 ARF1-012 228090488-228097453 processed_transcript
  ENST00000497165 ARF1-011 228088116-228097943 processed_transcript
  ENST00000540651 ARF1-201 228082660-228099211 protein_coding
  ENST00000541182 ARF1-202 228083150-228099211 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000272102ENST00000470558
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000272102 117.072±0.00 125.625±0.00 17.708±0.00 68.545±25.01 60.427±22.63 73.895±30.64 58.137±44.31 81.004±48.97 73.078±45.01 130.434±107.49 96.695±74.60 152.381±76.85 378.750±32.36 215.960±78.73
ENST00000470558 70.256±0.00 N/A N/A 79.816±0.00 57.772±0.00 78.120±0.00 N/A 78.859±0.00 N/A 134.597±0.00 75.426±0.00 87.496±0.00 N/A 82.097±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0002090 ISS regulation of receptor internalization
GO:0003924 TAS:IEA GTPase activity
GO:0004871 IEA signal transducer activity
GO:0005057 TAS receptor signaling protein activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0005829 TAS cytosol
GO:0005886 TAS plasma membrane
GO:0005925 IDA focal adhesion
GO:0006184 TAS GTP catabolic process
GO:0006644 TAS phospholipid metabolic process
GO:0006661 TAS phosphatidylinositol biosynthetic process
GO:0006878 IMP cellular copper ion homeostasis
GO:0006886 IEA intracellular protein transport
GO:0006890 TAS retrograde vesicle-mediated transport, Golgi to ER
GO:0006892 TAS post-Golgi vesicle-mediated transport
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007264 IEA small GTPase mediated signal transduction
GO:0012505 IEA endomembrane system
GO:0015031 IEA protein transport
GO:0016032 TAS viral process
GO:0016192 IEA vesicle-mediated transport
GO:0019001 IEA guanyl nucleotide binding
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030017 IEA sarcomere
GO:0031683 IEA G-protein beta/gamma-subunit complex binding
GO:0034315 ISS regulation of Arp2/3 complex-mediated actin nucleation
GO:0043005 IEA neuron projection
GO:0044281 TAS small molecule metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0045211 IEA postsynaptic membrane
GO:0048205 TAS COPI coating of Golgi vesicle
GO:0050690 TAS regulation of defense response to virus by virus
GO:0060292 ISS long term synaptic depression
GO:0061024 TAS membrane organization
GO:0070062 IDA extracellular vesicular exosome
GO:0097061 ISS dendritic spine organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009484 arf1 ADP-ribosylation factor 1 protein_coding Danio_rerio
ENSDARG00000014763 arf2 ADP-ribosylation factor 2 protein_coding Danio_rerio
ENSDARG00000016393 arf1l ADP-ribosylation factor 1 like protein_coding Danio_rerio
ENSMUSG00000048076 Arf1 ADP-ribosylation factor 1 protein_coding Mus_musculus

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