C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pyrroline-5-carboxylate reductase family, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000143811 PYCR2 9606 - 1:225919877-225924340 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000343818 PYCR2-001 225919878-225924259 protein_coding
  ENST00000446534 PYCR2-008 225921222-225923079 retained_intron
  ENST00000466127 PYCR2-009 225921216-225921934 retained_intron
  ENST00000467298 PYCR2-005 225923140-225924000 retained_intron
  ENST00000472798 PYCR2-007 225922029-225923891 protein_coding
  ENST00000478402 PYCR2-002 225919878-225924278 retained_intron
  ENST00000489681 PYCR2-006 225921604-225923993 protein_coding
  ENST00000612039 PYCR2-201 225919877-225924340 protein_coding
  ENST00000612651 PYCR2-202 225919877-225924110 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000343818ENST00000446534ENST00000467298ENST00000478402ENST00000489681ENST00000612039ENST00000612651
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000343818 14.601±0.00 16.952±0.00 1.715±0.00 18.728±0.00 8.201±4.69 7.655±6.74 17.147±0.00 33.151±0.00 7.004±5.89 17.116±15.91 14.402±11.19 27.161±10.11 32.185±5.12 28.456±0.00
ENST00000446534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.405±0.00 N/A N/A
ENST00000467298 N/A N/A N/A N/A N/A N/A N/A 1.587±0.00 N/A N/A N/A N/A N/A N/A
ENST00000478402 N/A N/A N/A 1.226±0.00 0.692±0.00 N/A 0.320±0.00 N/A N/A N/A N/A 4.811±0.00 N/A 3.610±0.00
ENST00000489681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.668±0.00 N/A 15.907±0.00
ENST00000612039 3.460±0.00 8.776±0.00 1.257±0.00 6.169±0.33 3.084±0.80 2.482±0.00 3.344±0.00 N/A 1.892±0.00 1.480±0.00 5.117±0.00 16.073±11.03 N/A 19.723±0.00
ENST00000612651 N/A N/A N/A N/A N/A N/A N/A 0.739±0.00 3.379±0.00 1.011±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007R5 CIL_0007R5_0001 VISTA 1:225466688-226068183
CIL_0005S1 CIL_0005S1_0001 CGP 1:225886282-225924278
CIL_0005S0 CIL_0005S0_0001 CGP 1:225919877-225941489

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004735 IEA pyrroline-5-carboxylate reductase activity
GO:0005737 IEA cytoplasm
GO:0006561 IEA proline biosynthetic process
GO:0016616 IEA oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0046168 IEA glycerol-3-phosphate catabolic process
GO:0051287 IEA NAD binding
GO:0055114 IEA oxidation-reduction process
GO:0055129 IEA L-proline biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053965 pycr1a pyrroline-5-carboxylate reductase 1a protein_coding Danio_rerio
ENSDARG00000086821 pycr1b pyrroline-5-carboxylate reductase 1b protein_coding Danio_rerio
ENSMUSG00000026520 Pycr2 pyrroline-5-carboxylate reductase family, member 2 protein_coding Mus_musculus

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