C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: KIAA1715
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000144320 KIAA1715 9606 - 2:175923892-176002839 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000272748 KIAA1715-001 175923892-176002345 protein_coding
  ENST00000392540 KIAA1715-008 175970764-176002263 protein_coding
  ENST00000409660 KIAA1715-002 175929173-176002274 protein_coding
  ENST00000431754 KIAA1715-005 175929969-175947510 nonsense_mediated_decay
  ENST00000445472 KIAA1715-009 175992239-176002839 protein_coding
  ENST00000466445 KIAA1715-010 175993181-176002786 processed_transcript
  ENST00000475515 KIAA1715-003 175929946-175938336 processed_transcript
  ENST00000479012 KIAA1715-004 175929939-175937856 retained_intron
  ENST00000480788 KIAA1715-007 175937478-175939754 retained_intron
  ENST00000483230 KIAA1715-011 175992231-176002279 processed_transcript
  ENST00000489827 KIAA1715-006 175937468-175938807 retained_intron
  ENST00000544803 KIAA1715-201 175923897-176002294 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000272748ENST00000409660ENST00000431754ENST00000445472ENST00000544803
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000272748 3.011±0.00 0.595±0.00 1.039±0.00 3.715±1.89 1.541±0.21 1.802±0.77 1.434±0.16 1.883±0.51 4.515±0.00 2.010±1.03 3.402±1.32 2.877±1.82 1.486±0.97 1.903±0.00
ENST00000409660 N/A N/A N/A 3.969±0.00 2.653±0.00 N/A 4.227±0.00 1.236±0.00 N/A N/A 4.443±0.00 N/A 0.622±0.00 5.577±0.43
ENST00000431754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.165±0.00
ENST00000445472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.931±0.00
ENST00000544803 N/A N/A N/A N/A 1.074±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.996±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L2 CIL_0007L2_0001 UCNEbase 2:175103181-177219808
CIL_0001H5 CIL_0001H5_0001 CGP 2:175176258-176002839
CIL_00090A CIL_00090A_0001 VISTA 2:175589301-176190657
CIL_0008JZ CIL_0008JZ_0001 VISTA 2:175775342-176376682
CIL_0001H8 CIL_0001H8_0001 CGP 2:175923892-176083913

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005789 IDA endoplasmic reticulum membrane
GO:0007596 IEA blood coagulation
GO:0016021 NAS integral component of membrane
GO:0032330 IEA regulation of chondrocyte differentiation
GO:0035115 IEA embryonic forelimb morphogenesis
GO:0042733 IEA embryonic digit morphogenesis
GO:0046872 IEA metal ion binding
GO:0060173 NAS limb development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006639 lnpb limb and neural patterns b protein_coding Danio_rerio
ENSDARG00000063646 lnpa limb and neural patterns a protein_coding Danio_rerio
ENSMUSG00000009207 Lnp limb and neural patterns protein_coding Mus_musculus

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