C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: KIAA1715
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409660 KIAA1715-002 ENSG00000144320 9606 - 2:175929173-176002274 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartKidneyMusclePlacentaTestisENST00000409660
Transcript ID Brain Breast Heart Kidney Muscle Placenta Testis
ENST00000409660 3.969±0.00 2.653±0.00 4.227±0.00 1.236±0.00 4.443±0.00 0.622±0.00 5.577±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L2 CIL_0007L2_0001 UCNEbase 2:175103181-177219808
CIL_0001H5 CIL_0001H5_0001 CGP 2:175176258-176002839
CIL_00090A CIL_00090A_0001 VISTA 2:175589301-176190657
CIL_0008JZ CIL_0008JZ_0001 VISTA 2:175775342-176376682
CIL_0001H8 CIL_0001H8_0001 CGP 2:175923892-176083913

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005789 IDA endoplasmic reticulum membrane
GO:0016021 NAS integral component of membrane
GO:0046872 IEA metal ion binding
GO:0060173 NAS limb development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000064503 Lnp-001 protein_coding Mus_musculus 0 1208
ENSMUST00000134641 Lnp-002 processed_transcript Mus_musculus 0 1127
ENSMUST00000102676 Lnp-004 protein_coding Mus_musculus 0 953
ENSMUST00000111993 Lnp-013 protein_coding Mus_musculus 0 953
ENSMUST00000127168 Lnp-005 processed_transcript Mus_musculus 0 689
ENSMUST00000130586 Lnp-012 protein_coding Mus_musculus 0 634
ENSMUST00000130232 Lnp-009 protein_coding Mus_musculus 0 483
ENSMUST00000155006 Lnp-011 processed_transcript Mus_musculus 0 285
ENSMUST00000134764 Lnp-006 processed_transcript Mus_musculus 0 207
ENSMUST00000154706 Lnp-003 processed_transcript Mus_musculus 3.00004e-41 174
ENSMUST00000145293 Lnp-008 processed_transcript Mus_musculus 6e-38 163
ENSMUST00000134168 Lnp-007 protein_coding Mus_musculus 2e-27 128
ENSMUST00000145933 Lnp-010 processed_transcript Mus_musculus 0.0001 53

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