C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 134, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000144567 FAM134A 9606 + 2:219176225-219185479 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000273048 FAM134A-002 219178227-219183492 nonsense_mediated_decay
  ENST00000420189 FAM134A-004 219181678-219183800 protein_coding
  ENST00000430297 FAM134A-001 219178217-219185479 protein_coding
  ENST00000430747 FAM134A-008 219178714-219180750 protein_coding
  ENST00000443757 FAM134A-006 219177923-219180751 protein_coding
  ENST00000452022 FAM134A-009 219178727-219181663 protein_coding
  ENST00000452293 FAM134A-007 219178277-219180754 nonsense_mediated_decay
  ENST00000458520 FAM134A-005 219176225-219182120 protein_coding
  ENST00000465672 FAM134A-010 219178986-219180239 retained_intron
  ENST00000481925 FAM134A-011 219180668-219181693 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000273048ENST00000420189ENST00000430297ENST00000452022ENST00000458520
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000273048 16.502±0.00 11.877±0.00 2.552±0.00 27.873±13.07 12.993±0.00 7.821±6.61 3.144±2.46 14.507±7.05 6.078±2.84 7.255±4.49 15.065±0.00 13.977±8.66 13.803±5.12 54.606±7.40
ENST00000420189 N/A 12.228±0.00 N/A 17.459±0.00 10.557±0.00 11.759±0.00 4.125±0.00 21.622±0.00 8.788±0.00 8.459±0.00 N/A 15.177±1.61 11.028±1.92 37.017±2.90
ENST00000430297 8.027±0.00 6.583±0.00 1.197±0.00 4.675±0.09 5.063±1.53 2.535±0.75 1.686±0.72 N/A 2.391±0.41 3.242±0.00 0.314±0.00 4.723±2.10 4.240±0.45 N/A
ENST00000452022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.890±0.00 8.160±0.00 N/A N/A
ENST00000458520 N/A N/A N/A 19.073±0.00 5.057±0.00 2.821±0.00 2.056±0.00 N/A N/A N/A N/A 3.542±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006EE CIL_0006EE_0001 CGP 2:219075329-219178106
CIL_000916 CIL_000916_0001 VISTA 2:219106772-219707284
CIL_0000OL CIL_0000OL_0001 CGP 2:219171897-219185479
CIL_0006E8 CIL_0006E8_0001 CGP 2:219176225-219209651

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063270 fam134a family with sequence similarity 134, member A protein_coding Danio_rerio
ENSMUSG00000049339 Fam134a family with sequence similarity 134, member A protein_coding Mus_musculus

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