C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 134, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000049339 Fam134a 10090 + 1:75142778-75147913 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000097694 Fam134a-001 75142786-75147913 protein_coding
  ENSMUST00000186037 Fam134a-003 75143165-75147907 protein_coding
  ENSMUST00000187901 Fam134a-007 75143182-75144377 protein_coding
  ENSMUST00000188873 Fam134a-004 75142778-75147909 nonsense_mediated_decay
  ENSMUST00000188977 Fam134a-008 75143378-75144109 retained_intron
  ENSMUST00000189345 Fam134a-005 75145304-75145761 protein_coding
  ENSMUST00000189650 Fam134a-006 75142980-75144664 protein_coding
  ENSMUST00000190240 Fam134a-002 75142794-75147909 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000097694ENSMUST00000186037ENSMUST00000188873ENSMUST00000190240
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000097694 35.830±4.03 47.391±10.72 27.243±5.35 69.454±10.02 47.033±6.01 48.811±5.25 10.056±1.75 59.946±10.20 49.987±13.03 41.823±1.49 2.530±1.18 45.732±9.63 21.206±8.97 91.575±2.97
ENSMUST00000186037 9.463±0.00 N/A N/A 19.717±0.00 12.752±2.89 N/A 4.296±1.77 N/A 17.929±0.00 N/A 1.646±1.20 20.074±6.80 9.123±6.19 4.464±0.00
ENSMUST00000188873 N/A 10.265±0.00 N/A N/A 8.510±1.36 12.676±1.02 N/A N/A 14.145±0.00 6.731±0.00 1.345±0.45 15.649±4.54 5.359±0.00 N/A
ENSMUST00000190240 7.546±0.67 39.212±9.46 5.061±0.17 6.911±0.00 14.018±8.14 8.413±0.00 2.440±0.62 30.473±6.57 40.518±22.70 9.903±2.19 0.617±0.28 27.064±10.10 5.081±0.71 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0002 VISTA 1:75047166-75647630
CIL_0000OL CIL_0000OL_0002 CGP 1:75134554-75147913
CIL_0006E8 CIL_0006E8_0002 CGP 1:75142778-75171629

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063270 fam134a family with sequence similarity 134, member A protein_coding Danio_rerio
ENSG00000144567 FAM134A family with sequence similarity 134, member A protein_coding Homo_sapiens

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