C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine-rich repeats and transmembrane domains 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000144771 LRTM1 9606 - 3:54918237-54967088 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000273286 LRTM1-001 54918237-54928074 protein_coding
  ENST00000493075 LRTM1-002 54918333-54967088 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000273286ENST00000493075
Transcript ID Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000273286 0.054±0.00 N/A 0.057±0.00 0.043±0.00 N/A 0.011±0.00 N/A 0.068±0.00 0.121±0.00 N/A N/A N/A
ENST00000493075 N/A 0.277±0.00 0.149±0.13 N/A 0.027±0.00 N/A 0.167±0.00 0.140±0.00 0.151±0.00 0.144±0.05 0.038±0.00 0.036±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001F9 CIL_0001F9_0002 CGP 3:54122547-55074557
CIL_000926 CIL_000926_0001 VISTA 3:54683448-55284533

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045205 LRTM1 leucine-rich repeats and transmembrane domains 1 protein_coding Danio_rerio
ENSMUSG00000045776 Lrtm1 leucine-rich repeats and transmembrane domains 1 protein_coding Mus_musculus

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