C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine-rich repeats and transmembrane domains 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000045776 Lrtm1 10090 + 14:29018208-29033642 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000055662 Lrtm1-201 29018208-29033642 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055662
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055662 0.312±0.10 0.091±0.03 0.010±0.00 0.067±0.07 0.824±0.23 0.012±0.00 37.282±4.67 0.097±0.06 1.877±1.82 0.381±0.31 3.978±1.12 0.114±0.04 0.005±0.00 0.042±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00002U CIL_00002U_0002 CGP 14:28504750-29721864
CIL_000926 CIL_000926_0002 VISTA 14:28672334-29273645
CIL_0001F9 CIL_0001F9_0003 CGP 14:28904943-29721864

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045205 LRTM1 leucine-rich repeats and transmembrane domains 1 protein_coding Danio_rerio
ENSG00000144771 LRTM1 leucine-rich repeats and transmembrane domains 1 protein_coding Homo_sapiens

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