C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ADAM metallopeptidase with thrombospondin type 1 motif, 16
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000145536 ADAMTS16 9606 + 5:5140330-5320304 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000274181 ADAMTS16-001 5140330-5320304 protein_coding
  ENST00000433402 ADAMTS16-003 5140468-5303807 retained_intron
  ENST00000511368 ADAMTS16-002 5140330-5223727 protein_coding
  ENST00000513709 ADAMTS16-005 5235037-5239187 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000274181ENST00000433402ENST00000511368
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000274181 0.221±0.00 0.033±0.00 0.162±0.00 0.110±0.00 0.488±0.39 0.199±0.17 0.016±0.00 1.372±0.00 0.477±0.46 0.113±0.00 3.121±4.06 0.062±0.04 0.281±0.22
ENST00000433402 0.088±0.00 N/A N/A N/A N/A 0.136±0.06 N/A N/A 0.396±0.35 0.145±0.00 0.606±0.58 0.218±0.00 N/A
ENST00000511368 N/A 0.027±0.00 N/A 0.106±0.03 N/A 0.046±0.00 0.028±0.02 0.159±0.14 0.372±0.00 0.112±0.00 N/A 0.020±0.00 0.089±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003O0 CIL_0003O0_0002 CGP 5:3596054-5320304

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001658 IEA branching involved in ureteric bud morphogenesis
GO:0004222 IEA metalloendopeptidase activity
GO:0005578 IEA proteinaceous extracellular matrix
GO:0006508 IEA proteolysis
GO:0008233 IEA peptidase activity
GO:0008270 IEA zinc ion binding
GO:0031012 IEA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074646 ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif, 16 protein_coding Danio_rerio
ENSMUSG00000049538 Adamts16 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein_coding Mus_musculus

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