C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADAM metallopeptidase with thrombospondin type 1 motif, 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000274181 ADAMTS16-001 ENSG00000145536 9606 + 5:5140330-5320304 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000274181
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000274181 0.221±0.00 0.033±0.00 0.162±0.00 0.110±0.00 0.488±0.39 0.199±0.17 0.016±0.00 1.372±0.00 0.477±0.46 0.113±0.00 3.121±4.06 0.062±0.04 0.281±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003O0 CIL_0003O0_0002 CGP 5:3596054-5320304

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001658 IEA branching involved in ureteric bud morphogenesis
GO:0004222 IEA metalloendopeptidase activity
GO:0005578 IEA proteinaceous extracellular matrix
GO:0006508 IEA proteolysis
GO:0008233 IEA peptidase activity
GO:0008270 IEA zinc ion binding
GO:0031012 IEA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080145 Adamts16-001 protein_coding Mus_musculus 0 3107
ENSMUST00000109694 Adamts16-003 protein_coding Mus_musculus 0 2300
ENSMUST00000123552 Adamts16-002 nonsense_mediated_decay Mus_musculus 0 1888

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