C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003O0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000009510-ENSDARG00000074646 CGP 7955 16:820641-1199727
GeneTranscriptPositionBiotype
ENSDARG00000009510 (irx1a)
iroquois homeobox protein 1, a 		ENSDART00000006726 (irx1a-001) 820641-824798 protein_coding
ENSDART00000044190 (irx1a-002) 820650-824806 protein_coding
ENSDART00000082371 (irx1a-201) 820641-824571 protein_coding
ENSDARG00000074646 (ADAMTS16)
ADAM metallopeptidase with thrombospondin type 1 motif, 16 		ENSDART00000092657 (ADAMTS16-201) 1124610-1199727 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0003O0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000170549-ENSG00000145536 CGP 9606 5:3596054-5320304
GeneTranscriptPositionBiotype
ENSG00000145536 (ADAMTS16)
ADAM metallopeptidase with thrombospondin type 1 motif, 16 		ENST00000274181 (ADAMTS16-001) 5140330-5320304 protein_coding
ENST00000433402 (ADAMTS16-003) 5140468-5303807 retained_intron
ENST00000511368 (ADAMTS16-002) 5140330-5223727 protein_coding
ENST00000513709 (ADAMTS16-005) 5235037-5239187 processed_transcript
ENSG00000170549 (IRX1)
iroquois homeobox 1 		ENST00000302006 (IRX1-001) 3596054-3601403 protein_coding
ENSG00000223007 (RN7SKP73)
RNA, 7SK small nuclear pseudogene 73 		ENST00000411075 (RN7SKP73-201) 5126046-5126337 misc_RNA
ENSG00000231291 (RP11-445O3.1)
 ENST00000503188 (RP11-445O3.1-001) 4512262-4516776 lincRNA
ENSG00000248467 (CTD-2161F6.1)
 ENST00000515656 (CTD-2161F6.1-001) 4831699-4849800 lincRNA
ENSG00000248973 (RP11-445O3.2)
 ENST00000507435 (RP11-445O3.2-001) 4451930-4866221 lincRNA
ENSG00000249521 (CTD-2161F6.3)
 ENST00000503757 (CTD-2161F6.3-001) 4773481-4774865 lincRNA
ENSG00000249941 (CTD-2046I8.1)
 ENST00000505404 (CTD-2046I8.1-001) 4866521-4874759 lincRNA
ENSG00000249994 (CTD-2383I20.1)
 ENST00000506305 (CTD-2383I20.1-001) 4033713-4041764 lincRNA
ENSG00000250481 (CTD-2247C11.1)
 ENST00000509057 (CTD-2247C11.1-001) 4974690-5034267 lincRNA
ENSG00000250529 (CTD-2247C11.5)
 ENST00000507950 (CTD-2247C11.5-001) 5069192-5078311 lincRNA
ENSG00000250579 (CTD-2297D10.2)
uncharacterized LOC101929176 		ENST00000512155 (CTD-2297D10.2-001) 5132780-5140054 antisense
ENSG00000250866 (CTD-2297D10.1)
 ENST00000514848 (CTD-2297D10.1-001) 5142138-5176214 antisense
ENSG00000250921 (CTD-2008N3.1)
 ENST00000503415 (CTD-2008N3.1-001) 4135682-4143648 lincRNA
ENSG00000251371 (CTD-2318H23.1)
 ENST00000513925 (CTD-2318H23.1-001) 4640731-4648254 lincRNA
ENSG00000251426 (CTD-2247C11.4)
 ENST00000502893 (CTD-2247C11.4-002) 5046980-5047454 lincRNA
ENST00000511514 (CTD-2247C11.4-001) 5046796-5049497 lincRNA
ENSG00000251506 (CTD-2247C11.2)
 ENST00000511721 (CTD-2247C11.2-001) 4967764-4970425 lincRNA
ENSG00000259603 (CTD-2012M11.3)
 ENST00000559410 (CTD-2012M11.3-001) 3596211-3600188 antisense
ENSG00000260763 (RP11-445O3.3)
 ENST00000562127 (RP11-445O3.3-001) 4436850-4440259 lincRNA

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003O0_0001ENSDARG00000009510ENSDART00000006726ENSDART00000044190ENSDART00000082371ENSDARG00000074646ENSDART00000092657CIL_0003O0_0002ENSG00000145536ENST00000274181ENST00000433402ENST00000511368ENST00000513709ENSG00000170549ENST00000302006ENSG00000223007ENST00000411075ENSG00000231291ENST00000503188ENSG00000248467ENST00000515656ENSG00000248973ENST00000507435ENSG00000249521ENST00000503757ENSG00000249941ENST00000505404ENSG00000249994ENST00000506305ENSG00000250481ENST00000509057ENSG00000250529ENST00000507950ENSG00000250579ENST00000512155ENSG00000250866ENST00000514848ENSG00000250921ENST00000503415ENSG00000251371ENST00000513925ENSG00000251426ENST00000502893ENST00000511514ENSG00000251506ENST00000511721ENSG00000259603ENST00000559410ENSG00000260763ENST00000562127
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003O0_0001ENSDARG00000009510ENSDART00000006726ENSDARG00000074646ENSDART00000092657CIL_0003O0_0002ENSG00000145536ENST00000274181ENST00000433402ENST00000511368ENSG00000170549ENST00000302006ENSG00000223007ENST00000411075ENSG00000231291ENST00000503188ENSG00000248467ENST00000515656ENSG00000248973ENST00000507435ENSG00000249521ENST00000503757ENSG00000249941ENST00000505404ENSG00000249994ENST00000506305ENSG00000250481ENST00000509057ENSG00000250529ENST00000507950ENSG00000250579ENST00000512155ENSG00000250866ENST00000514848ENSG00000250921ENST00000503415ENSG00000251371ENST00000513925ENSG00000251426ENST00000502893ENST00000511514ENSG00000251506ENST00000511721ENSG00000259603ENST00000559410ENSG00000260763ENST00000562127
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000009510 ENSDART00000006726 N/A N/A N/A 3.622±3.43 N/A N/A 25.183±17.39 2.697±0.00 0.111±0.00 N/A 1.651±0.00 N/A N/A N/A
ENSDART00000044190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000082371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000074646 ENSDART00000092657 N/A N/A N/A 0.216±0.04 N/A N/A 0.027±0.00 0.122±0.00 0.008±0.00 N/A 0.328±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000145536 ENST00000274181 0.221±0.00 0.033±0.00 0.162±0.00 0.110±0.00 0.488±0.39 0.199±0.17 0.016±0.00 1.372±0.00 0.477±0.46 0.113±0.00 N/A 3.121±4.06 0.062±0.04 0.281±0.22
ENST00000433402 0.088±0.00 N/A N/A N/A N/A 0.136±0.06 N/A N/A 0.396±0.35 0.145±0.00 N/A 0.606±0.58 0.218±0.00 N/A
ENST00000511368 N/A 0.027±0.00 N/A 0.106±0.03 N/A 0.046±0.00 0.028±0.02 0.159±0.14 0.372±0.00 0.112±0.00 N/A N/A 0.020±0.00 0.089±0.00
ENST00000513709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000170549 ENST00000302006 3.732±0.00 0.129±0.00 0.514±0.00 0.311±0.09 6.006±4.71 N/A 0.596±0.53 15.196±0.00 0.091±0.00 1.181±0.16 N/A N/A 0.060±0.01 0.329±0.26
ENSG00000223007 ENST00000411075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.225±0.00
ENSG00000231291 ENST00000503188 0.007±0.00 0.020±0.00 N/A 0.007±0.00 N/A N/A 0.006±0.00 0.059±0.00 N/A N/A 0.018±0.00 0.005±0.00 N/A 0.025±0.01
ENSG00000248467 ENST00000515656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.491±0.00
ENSG00000248973 ENST00000507435 0.096±0.00 0.137±0.00 N/A 0.101±0.00 0.019±0.00 0.035±0.00 N/A 0.019±0.00 N/A 0.034±0.00 N/A N/A 0.136±0.01 0.888±0.00
ENSG00000249521 ENST00000503757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.042±0.02 0.833±0.05
ENSG00000249941 ENST00000505404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.033±0.00
ENSG00000249994 ENST00000506305 0.197±0.00 0.451±0.00 N/A 0.635±0.00 0.543±0.00 0.126±0.00 0.234±0.00 0.484±0.00 N/A N/A 0.053±0.00 0.060±0.00 0.031±0.00 0.038±0.02
ENSG00000250481 ENST00000509057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.418±0.13
ENSG00000250529 ENST00000507950 N/A N/A N/A N/A N/A N/A N/A 0.065±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000250579 ENST00000512155 N/A 0.056±0.00 N/A 0.167±0.00 0.124±0.00 N/A N/A 1.526±0.00 N/A 0.088±0.00 N/A 0.938±0.51 N/A 0.368±0.00
ENSG00000250866 ENST00000514848 N/A N/A N/A N/A N/A N/A N/A 0.401±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000250921 ENST00000503415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.153±0.05
ENSG00000251371 ENST00000513925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.359±0.09
ENSG00000251426 ENST00000502893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.093±0.00
ENST00000511514 N/A N/A 0.268±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.175±0.07
ENSG00000251506 ENST00000511721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.105±0.00
ENSG00000259603 ENST00000559410 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.210±0.00 N/A N/A N/A 0.227±0.00
ENSG00000260763 ENST00000562127 0.041±0.00 0.099±0.00 N/A 0.029±0.00 0.053±0.00 0.047±0.00 0.034±0.00 0.092±0.00 0.017±0.00 0.039±0.00 0.040±0.00 0.020±0.00 N/A 0.061±0.00

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