C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: basic transcription factor 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000145741 BTF3 9606 + 5:73498408-73505635 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000335895 BTF3-001 73498408-73505495 protein_coding
  ENST00000380591 BTF3-002 73498449-73505635 protein_coding
  ENST00000507081 BTF3-009 73498510-73504403 protein_coding
  ENST00000508901 BTF3-007 73498473-73504829 retained_intron
  ENST00000509708 BTF3-006 73502591-73505493 protein_coding
  ENST00000510787 BTF3-005 73498457-73502685 retained_intron
  ENST00000512257 BTF3-003 73498431-73499651 retained_intron
  ENST00000514360 BTF3-008 73498442-73505495 retained_intron
  ENST00000514505 BTF3-010 73498436-73505435 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000335895ENST00000380591ENST00000510787ENST00000514505
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000335895 282.334±0.00 259.968±0.00 8.151±0.00 90.201±56.89 128.441±87.98 192.020±151.94 76.252±61.74 101.466±60.31 79.138±24.97 163.469±123.38 157.695±126.29 308.946±208.38 283.341±69.34 158.124±86.86
ENST00000380591 N/A N/A 1.462±0.00 N/A N/A 4.774±0.00 2.958±0.00 N/A N/A N/A 8.279±0.00 25.454±18.80 N/A N/A
ENST00000510787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 40.594±0.00 N/A
ENST00000514505 N/A N/A 4.021±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001701 IEA in utero embryonic development
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0015031 IEA protein transport
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035400 btf3 basic transcription factor 3 protein_coding Danio_rerio
ENSMUSG00000021660 Btf3 basic transcription factor 3 protein_coding Mus_musculus

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