C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: basic transcription factor 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021660 Btf3 10090 - 13:98309896-98317006 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022163 Btf3-001 98309896-98316967 protein_coding
  ENSMUST00000133461 Btf3-005 98309898-98311515 retained_intron
  ENSMUST00000133826 Btf3-004 98313039-98316996 retained_intron
  ENSMUST00000134542 Btf3-003 98309942-98316376 protein_coding
  ENSMUST00000152704 Btf3-002 98309897-98317006 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000133826ENSMUST00000134542ENSMUST00000152704
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000133826 N/A N/A 91.371±33.70 40.155±0.00 N/A N/A N/A N/A N/A N/A N/A 11.600±2.34 65.884±0.00 N/A
ENSMUST00000134542 50.558±7.26 21.245±3.56 N/A 33.092±0.00 63.220±22.69 45.414±7.54 26.231±2.91 41.167±3.68 26.704±3.04 36.127±2.11 N/A 53.186±29.41 58.111±31.95 92.641±12.49
ENSMUST00000152704 14.566±5.00 3.124±0.00 184.076±8.91 77.307±40.52 7.079±1.64 11.136±4.26 11.344±2.73 16.453±3.83 85.799±97.60 9.321±2.34 109.978±4.68 176.164±13.61 201.398±74.19 79.616±56.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0015031 IEA protein transport
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035400 btf3 basic transcription factor 3 protein_coding Danio_rerio
ENSG00000145741 BTF3 basic transcription factor 3 protein_coding Homo_sapiens

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