C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein phosphatase 1, regulatory subunit 18
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000146112 PPP1R18 9606 - 6:30676389-30687895 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000274853 PPP1R18-001 30676389-30687895 protein_coding
  ENST00000399199 PPP1R18-002 30676389-30687216 protein_coding
  ENST00000467662 PPP1R18-004 30676389-30687158 processed_transcript
  ENST00000488324 PPP1R18-003 30676389-30687193 processed_transcript
  ENST00000615527 PPP1R18-201 30676391-30687895 protein_coding
  ENST00000615892 PPP1R18-005 30676389-30684744 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000274853ENST00000399199ENST00000467662ENST00000488324ENST00000615527ENST00000615892
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000274853 N/A N/A 0.424±0.00 0.341±0.00 2.171±0.00 0.667±0.00 0.369±0.00 0.841±0.00 1.017±0.00 1.224±0.00 0.073±0.00 2.301±0.82 9.535±0.00 N/A
ENST00000399199 15.203±0.00 34.115±0.00 0.292±0.00 2.343±2.12 5.736±4.75 10.281±9.40 3.423±0.00 6.286±0.00 2.332±1.12 51.177±0.00 2.378±2.15 12.380±7.07 15.617±2.32 6.747±0.86
ENST00000467662 N/A N/A N/A N/A N/A N/A 1.920±0.00 N/A 3.425±0.00 N/A N/A 13.857±0.00 12.026±0.00 N/A
ENST00000488324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.710±0.00 N/A 10.186±0.00 N/A
ENST00000615527 10.377±0.00 14.241±0.00 0.431±0.00 1.749±1.41 3.950±1.76 7.816±7.14 1.270±0.90 1.649±0.78 2.767±1.40 19.581±18.32 1.779±1.70 10.793±9.68 6.086±2.85 5.821±0.00
ENST00000615892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.246±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0001 VISTA 6:30539989-31144784

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0019902 IEA phosphatase binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071251 ppp1r18 protein phosphatase 1, regulatory subunit 18 protein_coding Danio_rerio
ENSMUSG00000034595 Ppp1r18 protein phosphatase 1, regulatory subunit 18 protein_coding Mus_musculus

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