C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, regulatory subunit 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000274853 PPP1R18-001 ENSG00000146112 9606 - 6:30676389-30687895 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000274853
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000274853 0.424±0.00 0.341±0.00 2.171±0.00 0.667±0.00 0.369±0.00 0.841±0.00 1.017±0.00 1.224±0.00 0.073±0.00 2.301±0.82 9.535±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0001 VISTA 6:30539989-31144784

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0019902 IEA phosphatase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000187690 Ppp1r18-201 protein_coding Mus_musculus 0 933
ENSMUST00000113814 Ppp1r18-004 protein_coding Mus_musculus 0 933
ENSMUST00000122899 Ppp1r18-001 protein_coding Mus_musculus 0 933
ENSMUST00000144382 Ppp1r18-002 protein_coding Mus_musculus 0 933
ENSMUST00000127442 Ppp1r18-003 protein_coding Mus_musculus 0 845
ENSMUST00000190496 Ppp1r18-005 protein_coding Mus_musculus 0 708

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