C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, regulatory subunit 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399199 PPP1R18-002 ENSG00000146112 9606 - 6:30676389-30687216 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000399199
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000399199 15.203±0.00 34.115±0.00 0.292±0.00 2.343±2.12 5.736±4.75 10.281±9.40 3.423±0.00 6.286±0.00 2.332±1.12 51.177±0.00 2.378±2.15 12.380±7.07 15.617±2.32 6.747±0.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0001 VISTA 6:30539989-31144784

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0019902 IEA phosphatase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000187690 Ppp1r18-201 protein_coding Mus_musculus 0 933
ENSMUST00000113814 Ppp1r18-004 protein_coding Mus_musculus 0 933
ENSMUST00000122899 Ppp1r18-001 protein_coding Mus_musculus 0 933
ENSMUST00000144382 Ppp1r18-002 protein_coding Mus_musculus 0 933
ENSMUST00000127442 Ppp1r18-003 protein_coding Mus_musculus 0 845
ENSMUST00000190496 Ppp1r18-005 protein_coding Mus_musculus 0 708

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