C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RB-associated KRAB zinc finger
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000146587 RBAK 9606 + 7:5045821-5069488 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000353796 RBAK-001 5045821-5067257 protein_coding
  ENST00000396912 RBAK-201 5045922-5069488 protein_coding
  ENST00000476992 RBAK-002 5056987-5063875 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000353796ENST00000396912
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000353796 N/A 1.097±0.00 N/A N/A 0.777±0.00 0.502±0.00 N/A 0.949±0.00 N/A N/A N/A N/A
ENST00000396912 1.496±0.00 0.398±0.00 0.633±0.33 0.925±0.30 0.778±0.00 0.948±0.00 2.158±0.00 1.093±0.00 0.831±0.16 2.074±0.70 0.890±0.34 1.948±0.67

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005622 IEA intracellular
GO:0005634 TAS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 TAS:IEA regulation of transcription, DNA-templated
GO:0008270 NAS zinc ion binding
GO:0045892 TAS negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000061898 Rbak RB-associated KRAB repressor protein_coding Mus_musculus

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