C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chaperonin containing TCP1, subunit 6A (zeta 1)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000146731 CCT6A 9606 + 7:56051630-56063989 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000275603 CCT6A-001 56051630-56063989 protein_coding
  ENST00000335503 CCT6A-003 56051685-56063989 protein_coding
  ENST00000462133 CCT6A-007 56060611-56063299 processed_transcript
  ENST00000466479 CCT6A-009 56062619-56063620 retained_intron
  ENST00000466572 CCT6A-006 56059865-56060940 retained_intron
  ENST00000482776 CCT6A-010 56056312-56059010 retained_intron
  ENST00000492618 CCT6A-005 56059544-56062059 retained_intron
  ENST00000493855 CCT6A-004 56054476-56055856 retained_intron
  ENST00000494736 CCT6A-008 56061678-56063178 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000275603ENST00000335503ENST00000462133ENST00000482776ENST00000492618
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000275603 40.535±0.00 19.928±0.00 1.259±0.00 24.723±15.64 16.218±6.49 21.089±12.98 10.727±7.69 20.987±15.71 9.423±4.59 12.758±5.87 17.362±13.88 30.758±9.62 34.891±8.07 36.615±14.90
ENST00000335503 N/A 9.170±0.00 N/A N/A 6.894±0.00 16.820±0.00 N/A 11.167±0.00 3.832±0.00 N/A 8.551±0.00 N/A N/A 25.834±0.00
ENST00000462133 N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.629±0.00 N/A N/A N/A N/A
ENST00000482776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.319±0.00 N/A N/A N/A
ENST00000492618 N/A N/A N/A N/A N/A N/A 2.850±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000645 CIL_000645_0001 CGP 7:56011051-56063989
CIL_0006MA CIL_0006MA_0001 CGP 7:56051630-56080670

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001669 IEA acrosomal vesicle
GO:0002199 IEA zona pellucida receptor complex
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 TAS cytoplasm
GO:0005829 TAS cytosol
GO:0005832 IEA chaperonin-containing T-complex
GO:0005874 IDA microtubule
GO:0006457 TAS:IEA protein folding
GO:0007339 IEA binding of sperm to zona pellucida
GO:0044267 TAS:IEA cellular protein metabolic process
GO:0044297 IEA cell body
GO:0044822 IDA poly(A) RNA binding
GO:0051082 IEA unfolded protein binding
GO:0051084 TAS 'de novo' posttranslational protein folding
GO:0070062 IDA extracellular vesicular exosome
GO:1901998 IEA toxin transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021252 cct6a chaperonin containing TCP1, subunit 6A (zeta 1) protein_coding Danio_rerio
ENSMUSG00000029447 Cct6a chaperonin containing Tcp1, subunit 6a (zeta) protein_coding Mus_musculus

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