C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chaperonin containing TCP1, subunit 6A (zeta 1)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000275603 CCT6A-001 ENSG00000146731 9606 + 7:56051630-56063989 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000275603
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000275603 40.535±0.00 19.928±0.00 1.259±0.00 24.723±15.64 16.218±6.49 21.089±12.98 10.727±7.69 20.987±15.71 9.423±4.59 12.758±5.87 17.362±13.88 30.758±9.62 34.891±8.07 36.615±14.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000645 CIL_000645_0001 CGP 7:56011051-56063989
CIL_0006MA CIL_0006MA_0001 CGP 7:56051630-56080670

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001669 IEA acrosomal vesicle
GO:0002199 IEA zona pellucida receptor complex
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 TAS cytoplasm
GO:0005829 TAS cytosol
GO:0005832 IEA chaperonin-containing T-complex
GO:0005874 IDA microtubule
GO:0006457 TAS:IEA protein folding
GO:0007339 IEA binding of sperm to zona pellucida
GO:0044267 TAS:IEA cellular protein metabolic process
GO:0044297 IEA cell body
GO:0044822 IDA poly(A) RNA binding
GO:0051082 IEA unfolded protein binding
GO:0051084 TAS 'de novo' posttranslational protein folding
GO:0070062 IDA extracellular vesicular exosome
GO:1901998 IEA toxin transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031402 Cct6a-201 protein_coding Mus_musculus 0 1507

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