C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tripartite motif containing 50
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000146755 TRIM50 9606 - 7:73312539-73328082 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000333149 TRIM50-001 73312539-73328082 protein_coding
  ENST00000453152 TRIM50-002 73312911-73325571 protein_coding
  ENST00000488217 TRIM50-004 73313341-73316942 retained_intron
  ENST00000493498 TRIM50-003 73321899-73327954 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000333149ENST00000453152ENST00000488217ENST00000493498
Transcript ID Adipose Bladder Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000333149 0.098±0.00 N/A 0.192±0.00 N/A 0.106±0.00 N/A N/A 0.315±0.00 0.105±0.03 0.253±0.20 2.314±0.03
ENST00000453152 N/A 0.300±0.00 N/A 0.044±0.00 N/A 1.794±0.00 N/A N/A 0.218±0.12 0.166±0.10 1.159±0.00
ENST00000488217 0.047±0.00 N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 N/A N/A
ENST00000493498 N/A N/A N/A N/A 0.100±0.00 N/A 0.242±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005737 IEA cytoplasm
GO:0008152 IEA metabolic process
GO:0008270 IEA zinc ion binding
GO:0016874 IEA ligase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000053388 Trim50 tripartite motif-containing 50 protein_coding Mus_musculus

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