C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif containing 50
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000333149 TRIM50-001 ENSG00000146755 9606 - 7:73312539-73328082 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartMuscleOvaryPlacentaTestisENST00000333149
Transcript ID Adipose Breast Heart Muscle Ovary Placenta Testis
ENST00000333149 0.098±0.00 0.192±0.00 0.106±0.00 0.315±0.00 0.105±0.03 0.253±0.20 2.314±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005737 IEA cytoplasm
GO:0008152 IEA metabolic process
GO:0008270 IEA zinc ion binding
GO:0016874 IEA ligase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111180 Trim50-002 protein_coding Mus_musculus 0 1411
ENSMUST00000065785 Trim50-001 protein_coding Mus_musculus 0 1391

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