C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ripply transcriptional repressor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000147223 RIPPLY1 9606 - X:106900063-106903335 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000276173 RIPPLY1-002 106900063-106903317 protein_coding
  ENST00000411805 RIPPLY1-001 106900326-106903335 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLungMusclePlacentaTestisENST00000276173ENST00000411805
Transcript ID Colon Lung Muscle Placenta Testis
ENST00000276173 0.032±0.00 N/A N/A 0.047±0.00 0.097±0.00
ENST00000411805 N/A 0.620±0.00 0.125±0.00 0.061±0.02 0.234±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000174 CIL_000174_0002 CGP X:106900063-106930861

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001757 ISS somite specification
GO:0005634 ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007219 IEA Notch signaling pathway
GO:0009880 ISS embryonic pattern specification
GO:0010468 IEA regulation of gene expression
GO:0032525 ISS somite rostral/caudal axis specification
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0060349 IEA bone morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054103 ripply1 ripply1 protein_coding Danio_rerio
ENSMUSG00000072945 Ripply1 ripply1 homolog (zebrafish) protein_coding Mus_musculus

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