C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ripply1 homolog (zebrafish)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000072945 Ripply1 10090 - X:139779549-139782353 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000101217 Ripply1-001 139779549-139782353 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonKidneyLiverLungMuscleOvaryPlacentaENSMUST00000101217
Transcript ID Adipose Brain Colon Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000101217 0.054±0.01 0.105±0.05 0.410±0.18 0.093±0.04 0.702±0.64 0.108±0.05 0.088±0.05 0.177±0.16 22.701±23.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000174 CIL_000174_0003 CGP X:139779549-139811386

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001757 ISS somite specification
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005634 ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007219 IGI Notch signaling pathway
GO:0009880 ISS embryonic pattern specification
GO:0010468 IGI regulation of gene expression
GO:0032525 ISS somite rostral/caudal axis specification
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0060349 IGI bone morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054103 ripply1 ripply1 protein_coding Danio_rerio
ENSG00000147223 RIPPLY1 ripply transcriptional repressor 1 protein_coding Homo_sapiens

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