C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: R-spondin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000147655 RSPO2 9606 - 8:107899316-108083648 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000276659 RSPO2-001 107899317-108083648 protein_coding
  ENST00000517781 RSPO2-002 107899316-108083203 protein_coding
  ENST00000517939 RSPO2-003 107899316-108081956 protein_coding
  ENST00000520026 RSPO2-006 107960748-107997254 protein_coding
  ENST00000521502 RSPO2-008 107901102-108073089 protein_coding
  ENST00000521757 RSPO2-007 107958228-107989555 protein_coding
  ENST00000521956 RSPO2-005 107960737-108082836 protein_coding
  ENST00000522333 RSPO2-004 107989109-108083642 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000276659ENST00000517781ENST00000517939ENST00000521502ENST00000521956ENST00000522333
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000276659 N/A 5.528±1.99 0.155±0.00 N/A N/A N/A N/A 0.654±0.00 N/A 0.040±0.00 3.169±2.60 0.129±0.00
ENST00000517781 N/A N/A N/A 0.450±0.37 N/A 0.009±0.00 0.044±0.01 N/A 0.053±0.00 N/A 2.789±0.00 N/A
ENST00000517939 0.078±0.00 N/A N/A N/A 0.018±0.00 N/A 0.034±0.00 N/A 0.007±0.00 0.123±0.06 N/A 0.241±0.19
ENST00000521502 N/A 7.011±0.00 0.019±0.00 0.356±0.00 0.028±0.00 N/A N/A 1.385±0.00 N/A N/A 12.293±0.00 0.603±0.00
ENST00000521956 N/A N/A N/A N/A N/A N/A N/A 1.372±0.00 N/A N/A N/A N/A
ENST00000522333 N/A N/A N/A N/A N/A N/A 0.403±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000608 CIL_000608_0001 CGP 8:107249482-108083648
CIL_0004T1 CIL_0004T1_0002 CGP 8:107899316-108435333

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001649 IEA osteoblast differentiation
GO:0005102 IPI receptor binding
GO:0005576 IEA extracellular region
GO:0008201 IEA heparin binding
GO:0009986 IEA cell surface
GO:0016055 IEA Wnt signaling pathway
GO:0030282 IEA bone mineralization
GO:0035115 IEA embryonic forelimb morphogenesis
GO:0035116 IEA embryonic hindlimb morphogenesis
GO:0060437 IEA lung growth
GO:0060441 IEA epithelial tube branching involved in lung morphogenesis
GO:0060535 IEA trachea cartilage morphogenesis
GO:0090263 IEA positive regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079570 rspo2 R-spondin 2 protein_coding Danio_rerio
ENSMUSG00000051920 Rspo2 R-spondin 2 homolog (Xenopus laevis) protein_coding Mus_musculus

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