C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000608_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000154188-ENSG00000147655 CGP 9606 8:107249482-108083648
GeneTranscriptPositionBiotype
ENSG00000147655 (RSPO2)
R-spondin 2 		ENST00000276659 (RSPO2-001) 107899317-108083648 protein_coding
ENST00000517781 (RSPO2-002) 107899316-108083203 protein_coding
ENST00000517939 (RSPO2-003) 107899316-108081956 protein_coding
ENST00000520026 (RSPO2-006) 107960748-107997254 protein_coding
ENST00000521502 (RSPO2-008) 107901102-108073089 protein_coding
ENST00000521757 (RSPO2-007) 107958228-107989555 protein_coding
ENST00000521956 (RSPO2-005) 107960737-108082836 protein_coding
ENST00000522333 (RSPO2-004) 107989109-108083642 protein_coding
ENSG00000154188 (ANGPT1)
angiopoietin 1 		ENST00000297450 (ANGPT1-003) 107249493-107498055 protein_coding
ENST00000517746 (ANGPT1-001) 107249482-107498010 protein_coding
ENST00000518386 (ANGPT1-007) 107251527-107321989 processed_transcript
ENST00000520033 (ANGPT1-006) 107346983-107494995 protein_coding
ENST00000520052 (ANGPT1-009) 107251512-107336522 protein_coding
ENST00000520734 (ANGPT1-002) 107251512-107336522 protein_coding
ENST00000521950 (ANGPT1-005) 107283997-107321993 retained_intron
ENST00000522400 (ANGPT1-008) 107284519-107295541 retained_intron
ENSG00000253228 (NRBF2P4)
nuclear receptor binding factor 2 pseudogene 4 		ENST00000520874 (NRBF2P4-001) 107983116-107983965 processed_pseudogene
CIL_000608_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022309-ENSMUSG00000051920 CGP 10090 15:42424727-43170818
GeneTranscriptPositionBiotype
ENSMUSG00000022309 (Angpt1)
angiopoietin 1 		ENSMUST00000022921 (Angpt1-201) 42424727-42676977 protein_coding
ENSMUSG00000051920 (Rspo2)
R-spondin 2 homolog (Xenopus laevis) 		ENSMUST00000063492 (Rspo2-201) 43020811-43170818 protein_coding
ENSMUSG00000097805 (Gm17473)
predicted gene, 17473 		ENSMUST00000180585 (Gm17473-201) 42676260-42704616 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000608_0001ENSG00000147655ENST00000276659ENST00000517781ENST00000517939ENST00000520026ENST00000521502ENST00000521757ENST00000521956ENST00000522333ENSG00000154188ENST00000297450ENST00000517746ENST00000518386ENST00000520033ENST00000520052ENST00000520734ENST00000521950ENST00000522400ENSG00000253228ENST00000520874CIL_000608_0002ENSMUSG00000022309ENSMUST00000022921ENSMUSG00000051920ENSMUST00000063492ENSMUSG00000097805ENSMUST00000180585
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000608_0001ENSG00000147655ENST00000276659ENST00000517781ENST00000517939ENST00000521502ENST00000521956ENST00000522333ENSG00000154188ENST00000297450ENST00000517746ENST00000518386ENST00000520052ENST00000520734ENSG00000253228ENST00000520874CIL_000608_0002ENSMUSG00000022309ENSMUST00000022921ENSMUSG00000051920ENSMUST00000063492ENSMUSG00000097805ENSMUST00000180585
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000147655 ENST00000276659 N/A N/A N/A 5.528±1.99 0.155±0.00 N/A N/A N/A N/A 0.654±0.00 N/A 0.040±0.00 3.169±2.60 0.129±0.00
ENST00000517781 N/A N/A N/A N/A N/A 0.450±0.37 N/A 0.009±0.00 0.044±0.01 N/A 0.053±0.00 N/A 2.789±0.00 N/A
ENST00000517939 0.078±0.00 N/A N/A N/A N/A N/A 0.018±0.00 N/A 0.034±0.00 N/A 0.007±0.00 0.123±0.06 N/A 0.241±0.19
ENST00000520026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521502 N/A N/A N/A 7.011±0.00 0.019±0.00 0.356±0.00 0.028±0.00 N/A N/A 1.385±0.00 N/A N/A 12.293±0.00 0.603±0.00
ENST00000521757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521956 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.372±0.00 N/A N/A N/A N/A
ENST00000522333 N/A N/A N/A N/A N/A N/A N/A N/A 0.403±0.00 N/A N/A N/A N/A N/A
ENSG00000154188 ENST00000297450 0.614±0.00 N/A N/A 0.448±0.36 N/A 0.472±0.00 0.188±0.00 N/A N/A N/A N/A 0.184±0.00 N/A N/A
ENST00000517746 1.452±0.00 0.538±0.00 0.999±0.00 0.278±0.00 6.704±3.89 1.155±0.00 0.854±0.28 1.734±0.00 2.351±0.00 9.725±0.69 0.399±0.06 0.684±0.41 0.566±0.16 1.173±1.07
ENST00000518386 N/A N/A N/A N/A N/A N/A N/A 0.956±0.00 0.080±0.00 N/A 4.104±0.00 0.286±0.00 1.710±0.00 0.911±0.00
ENST00000520033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520052 N/A N/A N/A 0.289±0.00 N/A 1.256±0.00 0.957±0.00 N/A 1.747±0.00 6.155±0.00 N/A 0.789±0.00 0.374±0.00 N/A
ENST00000520734 N/A N/A 1.418±0.00 N/A 1.326±0.00 0.753±0.00 N/A N/A 2.057±0.00 N/A N/A 0.278±0.00 0.573±0.00 0.556±0.00
ENST00000521950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000253228 ENST00000520874 N/A N/A N/A N/A N/A N/A N/A N/A 0.015±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022309 ENSMUST00000022921 0.940±0.10 0.071±0.02 0.862±0.15 1.361±0.12 0.946±0.25 0.180±0.11 4.886±0.47 1.355±0.63 0.368±0.34 4.787±1.47 0.951±0.36 1.071±0.85 0.613±0.25 0.057±0.02
ENSMUSG00000051920 ENSMUST00000063492 0.033±0.01 N/A 0.019±0.01 2.368±1.80 0.170±0.05 0.082±0.03 0.030±0.00 0.011±0.00 0.030±0.02 0.148±0.02 0.024±0.01 1.066±0.42 0.020±0.01 0.049±0.03
ENSMUSG00000097805 ENSMUST00000180585 0.410±0.00 0.109±0.00 N/A N/A 0.326±0.14 0.149±0.05 1.059±0.00 0.762±0.16 0.237±0.00 1.985±0.14 N/A 0.205±0.05 N/A 0.023±0.00

Loading