C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hippocampus abundant transcript-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000148110 HIATL1 9606 + 9:94374551-94461042 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000375344 HIATL1-001 94374551-94461042 protein_coding
  ENST00000428393 HIATL1-201 94446854-94460919 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000375344ENST00000428393
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000375344 3.885±0.00 5.777±0.00 1.698±0.00 3.137±0.93 6.272±1.31 4.495±0.35 2.806±1.29 4.400±2.40 1.715±0.91 5.267±2.27 1.587±1.01 5.573±0.63 12.278±1.61 5.054±0.30
ENST00000428393 2.560±0.00 6.809±0.00 N/A 2.923±1.12 4.357±0.00 2.742±0.00 2.027±0.00 5.297±0.00 1.458±0.00 5.241±0.00 0.466±0.00 3.451±0.84 3.407±1.37 6.038±2.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XX CIL_0008XX_0001 VISTA 9:93838844-94440653

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010023 CU856539.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000030129 si:ch211-87m7.2 si:ch211-87m7.2 protein_coding Danio_rerio

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